brainGraph: Graph Theory Analysis of Brain MRI Data

A set of tools for performing graph theory analysis of brain MRI data. It works with data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), diffusion tensor tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from DPABI). It contains a graphical user interface for graph visualization and data exploration, along with several functions for generating useful figures.

Version: 2.2.0
Depends: R (≥ 3.0.0), igraph (≥ 1.0.0)
Imports: abind, ade4, boot, data.table, expm, foreach, ggplot2, ggrepel, gridExtra, Hmisc, MASS, Matrix, mediation, methods, oro.nifti, permute, parallel, RcppEigen, scales
Suggests: RGtk2, cairoDevice
Published: 2018-05-29
Author: Christopher G. Watson
Maintainer: Christopher G. Watson <cgwatson at>
License: GPL-3
NeedsCompilation: no
Materials: NEWS
CRAN checks: brainGraph results


Reference manual: brainGraph.pdf
Package source: brainGraph_2.2.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X binaries: r-release: brainGraph_2.2.0.tgz, r-oldrel: brainGraph_2.2.0.tgz
Old sources: brainGraph archive

Reverse dependencies:

Reverse imports: netjack


Please use the canonical form to link to this page.