NEWS

`nandb` 2.0.0

Robin Hood detrending is now used instead of exponential smoothing detrending. This is a breaking change.

The timeseries functions now have the option to overlap for better time resolution.
A pkgdown website!

matrix_raster_plot() is back. I thought it didn’t really fit but a user said they missed when it was gone so it’s back now.

The package is now peer-reviewed and published in the journal Bioinformatics. See citation("nandb").
The package style is now in accordance with the tidyverse style guide.
brightness() and number() now include options to set offset, S-factor, readout_noise and gamma correction terms.
brightness() and number() now enable calculation of both definitions (“B” and “epsilon”; “N” and “n”) of brightness and number.
Detrending is outsourced to the detrendr package. This new package makes detrending more accurate and much faster.
TIFF I/O and graphics display() are now outsourced to the ijtiff package. This means R users no longer have to tell nandb how many channels are in the images.
The package now has its own S3 class system.

Kmer calculations are no longer possible. The way in which they were done was over-simple.