An interface to the Integrated Taxonomic Information System (ITIS)
accepted_namesany_match_countcomment_detailcommon_namescore_metadatacoveragecredibility_ratingcredibility_ratingscurrencydate_datadescriptionexpertsfull_recordgeographic_divisionsgeographic_valuesglobal_species_completenesshierarchy_downhierarchy_fullhierarchy_upitis_facetitis_groupitis_highlightitis_searchjurisdiction_origin_valuesjurisdiction_valuesjurisdictional_originkingdom_namekingdom_nameslast_change_datelsid2tsnother_sourcesparent_tsnpublicationsrank_namerank_namesrecordreview_yearscientific_namesearch_any_match_pagedsearch_anymatchsearch_commonsearch_scientificsynonym_namestaxon_authorshiptermstsn_by_vernacular_languagetsn2lsidunacceptability_reasonusagevernacular_languagesStable, CRAN version
Dev version
matches only monomials
itis_search(q = "nameWOInd:/[A-Za-z0-9]*[%20]{0,0}*/")
#> # A tibble: 10 x 27
#> tsn nameWInd nameWOInd unit1 usage unacceptReason credibilityRati…
#> <chr> <chr> <chr> <chr> <chr> <chr> <chr>
#> 1 51 Schizom… Schizomy… Schi… inva… unavailable, … Minimum taxonom…
#> 2 50 Bacteria Bacteria Bact… valid <NA> TWG standards m…
#> 3 52 Archang… Archangi… Arch… inva… unavailable, … Minimum taxonom…
#> 4 53 Pseudom… Pseudomo… Pseu… valid <NA> TWG standards m…
#> 5 54 Rhodoba… Rhodobac… Rhod… inva… unavailable, … Minimum taxonom…
#> 6 55 Pseudom… Pseudomo… Pseu… inva… unavailable, … Minimum taxonom…
#> 7 56 Nitroba… Nitrobac… Nitr… inva… unavailable, … Minimum taxonom…
#> 8 57 Nitroba… Nitrobac… Nitr… valid <NA> TWG standards m…
#> 9 65 Nitroso… Nitrosom… Nitr… valid <NA> TWG standards m…
#> 10 70 Thiobac… Thiobact… Thio… inva… unavailable, … Minimum taxonom…
#> # … with 20 more variables: completenessRating <chr>,
#> # currencyRating <chr>, kingdom <chr>, rankID <chr>, rank <chr>,
#> # hierarchySoFar <chr>, hierarchySoFarWRanks <chr>, hierarchyTSN <chr>,
#> # synonyms <chr>, synonymTSNs <chr>, otherSource <chr>,
#> # acceptedTSN <chr>, comment <chr>, createDate <chr>, updateDate <chr>,
#> # `_version_` <dbl>, taxonAuthor <chr>, vernacular <chr>,
#> # hierarchicalSort <chr>, parentTSN <chr>matches only binomials
itis_search(q = "nameWOInd:/[A-Za-z0-9]*[%20]{1,1}[A-Za-z0-9]*/")
#> # A tibble: 10 x 25
#> tsn nameWInd nameWOInd unit1 unit2 usage unacceptReason
#> <chr> <chr> <chr> <chr> <chr> <chr> <chr>
#> 1 58 Nitroba… Nitrobac… Nitr… agil… inva… unavailable, …
#> 2 59 Nitroba… Nitrobac… Nitr… flav… inva… unavailable, …
#> 3 60 Nitroba… Nitrobac… Nitr… olig… inva… unavailable, …
#> 4 61 Nitroba… Nitrobac… Nitr… poly… inva… unavailable, …
#> 5 62 Nitroba… Nitrobac… Nitr… punc… inva… unavailable, …
#> 6 64 Nitroba… Nitrobac… Nitr… wino… valid <NA>
#> 7 66 Nitroso… Nitrosom… Nitr… euro… valid <NA>
#> 8 67 Nitroso… Nitrosom… Nitr… gron… inva… unavailable, …
#> 9 68 Nitroso… Nitrosom… Nitr… jave… inva… unavailable, …
#> 10 69 Nitroso… Nitrosom… Nitr… mono… inva… unavailable, …
#> # … with 18 more variables: credibilityRating <chr>, kingdom <chr>,
#> # rankID <chr>, rank <chr>, hierarchySoFar <chr>,
#> # hierarchySoFarWRanks <chr>, hierarchyTSN <chr>, synonyms <chr>,
#> # synonymTSNs <chr>, otherSource <chr>, acceptedTSN <chr>,
#> # comment <chr>, createDate <chr>, updateDate <chr>, `_version_` <dbl>,
#> # taxonAuthor <chr>, parentTSN <chr>, hierarchicalSort <chr>Get accepted names for a TSN
accepted_names(tsn = 504239)
#> # A tibble: 1 x 3
#> acceptedName acceptedTsn author
#> <chr> <chr> <chr>
#> 1 Dasiphora fruticosa 836659 (L.) Rydb.Get common names for a TSN
common_names(tsn = 183833)
#> # A tibble: 3 x 3
#> commonName language tsn
#> <chr> <chr> <chr>
#> 1 African hunting dog English 183833
#> 2 African Wild Dog English 183833
#> 3 Painted Hunting Dog English 183833Full hierarchy for a TSN
hierarchy_full(tsn = 37906)
#> # A tibble: 60 x 5
#> parentname parenttsn rankname taxonname tsn
#> <chr> <chr> <chr> <chr> <chr>
#> 1 "" "" Kingdom Plantae 202422
#> 2 Plantae 202422 Subkingdom Viridiplantae 954898
#> 3 Viridiplantae 954898 Infrakingdom Streptophyta 846494
#> 4 Streptophyta 846494 Superdivision Embryophyta 954900
#> 5 Embryophyta 954900 Division Tracheophyta 846496
#> 6 Tracheophyta 846496 Subdivision Spermatophytina 846504
#> 7 Spermatophytina 846504 Class Magnoliopsida 18063
#> 8 Magnoliopsida 18063 Superorder Asteranae 846535
#> 9 Asteranae 846535 Order Asterales 35419
#> 10 Asterales 35419 Family Asteraceae 35420
#> # … with 50 more rowsritis in R doing citation(package = 'ritis')