Last updated on 2019-06-18 01:48:55 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.5 | 48.06 | 569.73 | 617.79 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.5 | 39.23 | 449.60 | 488.83 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.2.5 | 639.18 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.5 | 608.05 | OK | |||
| r-devel-windows-ix86+x86_64 | 0.2.5 | 101.00 | 564.00 | 665.00 | OK | |
| r-patched-linux-x86_64 | 0.2.5 | 50.22 | 518.82 | 569.04 | OK | |
| r-patched-solaris-x86 | 0.2.5 | 910.40 | WARN | |||
| r-release-linux-x86_64 | 0.2.5 | 48.27 | 513.11 | 561.38 | OK | |
| r-release-windows-ix86+x86_64 | 0.2.5 | 70.00 | 485.00 | 555.00 | OK | |
| r-release-osx-x86_64 | 0.2.5 | WARN | ||||
| r-oldrel-windows-ix86+x86_64 | 0.2.5 | 49.00 | 547.00 | 596.00 | OK | |
| r-oldrel-osx-x86_64 | 0.2.5 | WARN |
Version: 0.2.5
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘i-introduction.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘i-introduction.Rmd’
--- re-building ‘ii-modules.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Attaching package: 'igraph'
The following objects are masked from 'package:stats':
decompose, spectrum
The following object is masked from 'package:base':
union
Loading required package: quickPlot
Loading required package: reproducible
Attaching package: 'SpaDES.core'
The following objects are masked from 'package:stats':
end, start
The following object is masked from 'package:utils':
citation
Loading required package: SpaDES.tools
Loading required package: RandomFields
Loading required package: sp
Loading required package: RandomFieldsUtils
Attaching package: 'RandomFields'
The following object is masked from 'package:RandomFieldsUtils':
RFoptions
Setting:
options(
spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
)
Paths set to:
options(
reproducible.cachePath = '/tmp/Rtmpi2aqht/reproducible/cache'
spades.inputPath = '/tmp/RtmpkvaWnw/SpaDES/inputs'
spades.outputPath = '/tmp/RtmpkvaWnw/SpaDES/outputs'
spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
)
Quitting from lines 376-382 (ii-modules.Rmd)
Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
there is no package called 'webshot'
--- failed re-building ‘ii-modules.Rmd’
--- re-building ‘iii-cache.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Loading required package: sp
Attaching package: 'raster'
The following object is masked from 'package:magrittr':
extract
Loading required package: quickPlot
Loading required package: reproducible
Attaching package: 'SpaDES.core'
The following objects are masked from 'package:stats':
end, start
The following object is masked from 'package:utils':
citation
Setting:
options(
spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
)
Paths set to:
options(
reproducible.cachePath = '/tmp/Rtmpi2aqht/reproducible/cache'
spades.inputPath = '/tmp/RtmpkvaWnw/SpaDES/inputs'
spades.outputPath = '/tmp/RtmpkvaWnw/SpaDES/outputs'
spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
)
--- finished re-building ‘iii-cache.Rmd’
SUMMARY: processing the following file failed:
‘ii-modules.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.2.5
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘i-introduction.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘i-introduction.Rmd’
--- re-building ‘ii-modules.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Attaching package: 'igraph'
The following objects are masked from 'package:stats':
decompose, spectrum
The following object is masked from 'package:base':
union
Loading required package: quickPlot
Loading required package: reproducible
Warning in fun(libname, pkgname) : couldn't connect to display ":0"
Attaching package: 'SpaDES.core'
The following objects are masked from 'package:stats':
end, start
The following object is masked from 'package:utils':
citation
Loading required package: SpaDES.tools
Loading required package: RandomFields
Loading required package: sp
Loading required package: RandomFieldsUtils
Attaching package: 'RandomFields'
The following object is masked from 'package:RandomFieldsUtils':
RFoptions
Setting:
options(
spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
)
Paths set to:
options(
reproducible.cachePath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/Rtmp8KUCdS/reproducible/cache'
spades.inputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpRT9IDE/SpaDES/inputs'
spades.outputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpRT9IDE/SpaDES/outputs'
spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
)
Quitting from lines 376-382 (ii-modules.Rmd)
Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘ii-modules.Rmd’
--- re-building ‘iii-cache.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Loading required package: sp
Attaching package: 'raster'
The following object is masked from 'package:magrittr':
extract
Loading required package: quickPlot
Loading required package: reproducible
Attaching package: 'SpaDES.core'
The following objects are masked from 'package:stats':
end, start
The following object is masked from 'package:utils':
citation
Setting:
options(
spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
)
Paths set to:
options(
reproducible.cachePath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/Rtmp8KUCdS/reproducible/cache'
spades.inputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpRT9IDE/SpaDES/inputs'
spades.outputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpRT9IDE/SpaDES/outputs'
spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
)
--- finished re-building ‘iii-cache.Rmd’
SUMMARY: processing the following file failed:
‘ii-modules.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-osx-x86_64
Version: 0.2.5
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
Loading required package: RandomFields
Loading required package: sp
Loading required package: RandomFieldsUtils
Attaching package: 'RandomFields'
The following object is masked from 'package:RandomFieldsUtils':
RFoptions
Setting:
options(
spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.5/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
)
Paths set to:
options(
reproducible.cachePath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpJ09Udo/reproducible/cache'
spades.inputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpsLoOb1/SpaDES/inputs'
spades.outputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpsLoOb1/SpaDES/outputs'
spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.5/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
)
Quitting from lines 376-382 (ii-modules.Rmd)
Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
cannot open the connection
Execution halted
Flavor: r-oldrel-osx-x86_64