Last updated on 2019-06-18 01:48:58 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.1 | 15.24 | 39.21 | 54.45 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.2.1 | 10.22 | 31.08 | 41.30 | WARN | |
| r-devel-linux-x86_64-fedora-clang | 1.2.1 | 63.72 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2.1 | 60.98 | WARN | |||
| r-devel-windows-ix86+x86_64 | 1.2.1 | 72.00 | 65.00 | 137.00 | OK | |
| r-patched-linux-x86_64 | 1.2.1 | 11.62 | 37.44 | 49.06 | WARN | |
| r-patched-solaris-x86 | 1.2.1 | 140.70 | OK | |||
| r-release-linux-x86_64 | 1.2.1 | 12.36 | 38.59 | 50.95 | WARN | |
| r-release-windows-ix86+x86_64 | 1.2.1 | 56.00 | 80.00 | 136.00 | OK | |
| r-release-osx-x86_64 | 1.2.1 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 1.2.1 | 51.00 | 78.00 | 129.00 | OK | |
| r-oldrel-osx-x86_64 | 1.2.1 | OK |
Version: 1.2.1
Check: examples
Result: ERROR
Running examples in 'TPmsm-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: transLS
> ### Title: Location-Scale transition probabilities
> ### Aliases: transLS
> ### Keywords: dplot nonparametric smooth survival
>
> ### ** Examples
>
> # Set the number of threads
> nth <- setThreadsTP(2)
>
> # Create survTP object
> data(bladderTP)
> bladderTP_obj <- with(bladderTP, survTP(time1, event1, Stime, event))
>
> # Compute transition probabilities
> LS0 <- transLS(object=bladderTP_obj, s=5, t=59, h=c(0.25, 2.5), nh=25, ncv=50, conf=FALSE)
> print(LS0)
Location-Scale transition probabilities
Estimates of P(5, 59)
1 2 3
1 0.5036414 0.1507066 0.3456520
2 0.0000000 0.3095259 0.6904741
3 0.0000000 0.0000000 1.0000000
>
> # Compute transition probabilities with confidence band
> h <- with( LS0, c( rep(h[1], 2), rep(h[2], 2) ) )
> transLS(object=bladderTP_obj, s=5, t=59, h=h, conf=TRUE,
+ conf.level=0.95, method.boot="percentile", boot.cv=FALSE)
Assertion failure at kmp_dispatch.cpp(977): pr.
OMP: Error #13: Assertion failure at kmp_dispatch.cpp(977).
OMP: Hint Please submit a bug report with this message, compile and run commands used, and machine configuration info including native compiler and operating system versions. Faster response will be obtained by including all program sources. For information on submitting this issue, please see https://bugs.llvm.org/.
Aborted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.2.1
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
RngStream.c:347:4: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=]
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.2.1
Check: examples
Result: ERROR
Running examples in ‘TPmsm-Ex.R’ failed
The error most likely occurred in:
> ### Name: transLS
> ### Title: Location-Scale transition probabilities
> ### Aliases: transLS
> ### Keywords: dplot nonparametric smooth survival
>
> ### ** Examples
>
> # Set the number of threads
> nth <- setThreadsTP(2)
>
> # Create survTP object
> data(bladderTP)
> bladderTP_obj <- with(bladderTP, survTP(time1, event1, Stime, event))
>
> # Compute transition probabilities
> LS0 <- transLS(object=bladderTP_obj, s=5, t=59, h=c(0.25, 2.5), nh=25, ncv=50, conf=FALSE)
> print(LS0)
Location-Scale transition probabilities
Estimates of P(5, 59)
1 2 3
1 0.5036414 0.1602728 0.3360858
2 0.0000000 0.3617209 0.6382791
3 0.0000000 0.0000000 1.0000000
>
> # Compute transition probabilities with confidence band
> h <- with( LS0, c( rep(h[1], 2), rep(h[2], 2) ) )
> transLS(object=bladderTP_obj, s=5, t=59, h=h, conf=TRUE,
+ conf.level=0.95, method.boot="percentile", boot.cv=FALSE)
*** caught segfault ***
address 0x88, cause 'memory not mapped'
Traceback:
1: TransPROB.LS(object, UT, nboot = nboot, ...)
2: TransPROB(object, UT, nboot = nboot, ...)
3: TPBoot.cboot(object, UT, n.boot, ...)
4: TPBoot(object, UT, n.boot, ...)
5: TransBoot.TP(object, s, t, state.names, n.boot, conf.level, method.boot, ...)
6: TransBoot(object, s, t, state.names, n.boot, conf.level, method.boot, ...)
7: TransMethod.TP(object, s, t, state.names, conf, n.boot, conf.level, method.boot, h = h, nh = nh, ncv = ncv, window = window, bootcv = boot.cv, cvfull = cv.full)
8: TransMethod(object, s, t, state.names, conf, n.boot, conf.level, method.boot, h = h, nh = nh, ncv = ncv, window = window, bootcv = boot.cv, cvfull = cv.full)
9: transLS(object = bladderTP_obj, s = 5, t = 59, h = h, conf = TRUE, conf.level = 0.95, method.boot = "percentile", boot.cv = FALSE)
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.2.1
Check: examples
Result: ERROR
Running examples in ‘TPmsm-Ex.R’ failed
The error most likely occurred in:
> ### Name: transLS
> ### Title: Location-Scale transition probabilities
> ### Aliases: transLS
> ### Keywords: dplot nonparametric smooth survival
>
> ### ** Examples
>
> # Set the number of threads
> nth <- setThreadsTP(2)
>
> # Create survTP object
> data(bladderTP)
> bladderTP_obj <- with(bladderTP, survTP(time1, event1, Stime, event))
>
> # Compute transition probabilities
> LS0 <- transLS(object=bladderTP_obj, s=5, t=59, h=c(0.25, 2.5), nh=25, ncv=50, conf=FALSE)
> print(LS0)
Location-Scale transition probabilities
Estimates of P(5, 59)
1 2 3
1 0.5036414 0.1495353 0.3468233
2 0.0000000 0.3059552 0.6940448
3 0.0000000 0.0000000 1.0000000
>
> # Compute transition probabilities with confidence band
> h <- with( LS0, c( rep(h[1], 2), rep(h[2], 2) ) )
> transLS(object=bladderTP_obj, s=5, t=59, h=h, conf=TRUE,
+ conf.level=0.95, method.boot="percentile", boot.cv=FALSE)
*** caught segfault ***
address 0x88, cause 'memory not mapped'
Traceback:
1: TransPROB.LS(object, UT, nboot = nboot, ...)
2: TransPROB(object, UT, nboot = nboot, ...)
3: TPBoot.cboot(object, UT, n.boot, ...)
4: TPBoot(object, UT, n.boot, ...)
5: TransBoot.TP(object, s, t, state.names, n.boot, conf.level, method.boot, ...)
6: TransBoot(object, s, t, state.names, n.boot, conf.level, method.boot, ...)
7: TransMethod.TP(object, s, t, state.names, conf, n.boot, conf.level, method.boot, h = h, nh = nh, ncv = ncv, window = window, bootcv = boot.cv, cvfull = cv.full)
8: TransMethod(object, s, t, state.names, conf, n.boot, conf.level, method.boot, h = h, nh = nh, ncv = ncv, window = window, bootcv = boot.cv, cvfull = cv.full)
9: transLS(object = bladderTP_obj, s = 5, t = 59, h = h, conf = TRUE, conf.level = 0.95, method.boot = "percentile", boot.cv = FALSE)
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-release-osx-x86_64