A framework to help construct R data packages in a reproducible manner. Potentially time consuming processing of raw data sets into analysis ready data sets is done in a reproducible manner and decoupled from the usual R CMD build process so that data sets can be processed into R objects in the data package and the data package can then be shared, built, and installed by others without the need to repeat computationally costly data processing. The package maintains data provenance by turning the data processing scripts into package vignettes, as well as enforcing documentation and version checking of included data objects. Data packages can be version controlled in github, and used to share data for manuscripts, collaboration and general reproducibility.
| Version: | 0.15.7 |
| Depends: | R (≥ 3.5.0) |
| Imports: | digest, knitr, utils, rmarkdown, desc, yaml, purrr, roxygen2 (≥ 6.0.1), devtools (≥ 1.12.0), assertthat, stringr, futile.logger, rprojroot, usethis, crayon |
| Suggests: | spelling, testthat, covr, data.tree |
| Published: | 2019-03-30 |
| Author: | Greg Finak [aut, cre, cph], Paul Obrecht [ctb], Ellis Hughes [ctb], Kara Woo [rev] (Kara reviewed the package for ropensci, see <https://github.com/ropensci/onboarding/issues/230>), William Landau [rev] (William reviewed the package for ropensci, see <https://github.com/ropensci/onboarding/issues/230>) |
| Maintainer: | Greg Finak <gfinak at fredhutch.org> |
| BugReports: | https://github.com/ropensci/DataPackageR/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/ropensci/DataPackageR |
| NeedsCompilation: | no |
| SystemRequirements: | pandoc (>= 1.12.3) - http://pandoc.org |
| Language: | en-US |
| Materials: | README NEWS |
| CRAN checks: | DataPackageR results |
| Reference manual: | DataPackageR.pdf |
| Vignettes: |
DataPackageR YAML configuration. A Guide to using DataPackageR |
| Package source: | DataPackageR_0.15.7.tar.gz |
| Windows binaries: | r-devel: DataPackageR_0.15.7.zip, r-release: DataPackageR_0.15.7.zip, r-oldrel: DataPackageR_0.15.7.zip |
| OS X binaries: | r-release: DataPackageR_0.15.7.tgz, r-oldrel: DataPackageR_0.15.7.tgz |
| Old sources: | DataPackageR archive |
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