CRAN Package Check Results for Package CNVScope

Last updated on 2019-07-03 01:47:14 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.9.7 33.86 489.40 523.26 NOTE
r-devel-linux-x86_64-debian-gcc 1.9.7 29.79 389.66 419.45 NOTE
r-devel-linux-x86_64-fedora-clang 1.9.7 655.62 NOTE
r-devel-linux-x86_64-fedora-gcc 1.9.7 644.24 NOTE
r-devel-windows-ix86+x86_64 1.9.7 126.00 540.00 666.00 OK
r-patched-linux-x86_64 1.9.7 33.03 474.59 507.62 OK
r-patched-solaris-x86 1.9.7 896.00 NOTE
r-release-linux-x86_64 1.9.7 33.46 480.28 513.74 OK
r-release-windows-ix86+x86_64 1.9.7 111.00 525.00 636.00 OK
r-release-osx-x86_64 1.9.7 ERROR
r-oldrel-windows-ix86+x86_64 1.9.7 73.00 466.00 539.00 OK
r-oldrel-osx-x86_64 1.9.7 ERROR

Check Details

Version: 1.9.7
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'chr1_chr1_melted.RData'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.9.7
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     'ComplexHeatmap' 'DT' 'blockseg' 'readr'
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86

Version: 1.9.7
Check: package dependencies
Result: ERROR
    Packages required but not available:
     'InteractionSet', 'S4Vectors', 'jointseg', 'GenomicFeatures',
     'GenomicInteractions', 'IRanges', 'biomaRt', 'ComplexHeatmap',
     'GenomicRanges', 'rtracklayer', 'BSgenome.Hsapiens.UCSC.hg19'
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Version: 1.9.7
Check: package dependencies
Result: ERROR
    Packages required but not available:
     ‘InteractionSet’ ‘GenomicFeatures’ ‘GenomicInteractions’
     ‘rtracklayer’ ‘BSgenome.Hsapiens.UCSC.hg19’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-oldrel-osx-x86_64