PIGE: Self Contained Gene Set Analysis for Gene- And Pathway-Environment Interaction Analysis

Extension of the 'ARTP' package (Yu, K., et al. (2009) <doi:10.1002/gepi.20422>) for gene- and pathway-environment interaction. A permutation and a parametric bootstrap approaches have been implemented for investigating gene- and pathway-environment interaction analysis (Truong, T., et al. (2014) <doi:10.1530/ERC-14-0121>).

Version: 1.1
Depends: snowfall, ARTP, xtable, survival
Published: 2017-08-30
Author: Benoit Liquet, Therese Truong, Camilo Broc
Maintainer: Benoit Liquet <benoit.liquet at univ-pau.fr>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)]
NeedsCompilation: no
CRAN checks: PIGE results


Reference manual: PIGE.pdf
Package source: PIGE_1.1.tar.gz
Windows binaries: r-devel: PIGE_1.1.zip, r-release: PIGE_1.1.zip, r-oldrel: PIGE_1.1.zip
OS X binaries: r-release: PIGE_1.1.tgz, r-oldrel: PIGE_1.1.tgz
Old sources: PIGE archive


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