lymphclon: Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates

We provide a clonality score estimator that takes full advantage of the multi-biological-replicate structure of modern sequencing experiments; it specifically takes into account the reality that, typically, the clonal coverage is well below 0.1%.

Version: 1.3.0
Depends: R (≥ 2.15.0)
Imports: MASS, expm, corpcor
Published: 2014-11-11
Author: Yi Liu [aut, cre], Richard A. Olshen [aut], Andrew Z. Fire [ctb], Scott D. Boyd [ctb]
Maintainer: Yi Liu <liuyipei at>
License: LGPL-2
NeedsCompilation: no
CRAN checks: lymphclon results


Reference manual: lymphclon.pdf
Package source: lymphclon_1.3.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X binaries: r-release: lymphclon_1.3.0.tgz, r-oldrel: lymphclon_1.3.0.tgz
Old sources: lymphclon archive


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