Interacts with a suite of web 'APIs' for taxonomic tasks, such as getting database specific taxonomic identifiers, verifying species names, getting taxonomic hierarchies, fetching downstream and upstream taxonomic names, getting taxonomic synonyms, converting scientific to common names and vice versa, and more.
| Version: | 0.9.8 |
| Depends: | R (≥ 3.2.1) |
| Imports: | graphics, methods, stats, utils, crul (≥ 0.7.0), xml2 (≥ 1.2.0), jsonlite, reshape2, stringr, plyr, foreach, ape, zoo, bold (≥ 0.8.6), data.table, rredlist (≥ 0.5.0), rotl (≥ 3.0.0), ritis (≥ 0.7.6), tibble (≥ 1.2), worrms (≥ 0.4.0), natserv (≥ 0.3.0), wikitaxa (≥ 0.3.0), R6, crayon, cli, phangorn |
| Suggests: | roxygen2 (≥ 6.1.1), testthat, knitr, vegan, vcr |
| Published: | 2019-06-28 |
| Author: | Scott Chamberlain  [aut, cre],
Eduard Szoecs [aut],
Zachary Foster [aut],
Zebulun Arendsee [aut],
Carl Boettiger [ctb],
Karthik Ram [ctb],
Ignasi Bartomeus [ctb],
John Baumgartner [ctb],
James O'Donnell [ctb],
Jari Oksanen [ctb],
Bastian Greshake Tzovaras [ctb],
Philippe Marchand [ctb],
Vinh Tran [ctb],
Maëlle Salmon [ctb],
Gaopeng Li [ctb],
Matthias Grenié [ctb],
rOpenSci [fnd] (https://ropensci.org/) |
| Maintainer: | Scott Chamberlain <myrmecocystus at gmail.com> |
| BugReports: | https://github.com/ropensci/taxize/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/ropensci/taxize (devel), https://ropenscilabs.github.io/taxize-book/ (user manual) |
| NeedsCompilation: | no |
| Language: | en-US |
| Citation: | taxize citation info |
| Materials: | README NEWS |
| In views: | Phylogenetics |
| CRAN checks: | taxize results |
| Reference manual: | taxize.pdf |
| Vignettes: |
Strategies for programmatic name cleaning Case study - resolving Species Plantarum names Key functions taxize vignette |
| Package source: | taxize_0.9.8.tar.gz |
| Windows binaries: | r-devel: taxize_0.9.8.zip, r-release: taxize_0.9.8.zip, r-oldrel: taxize_0.9.8.zip |
| OS X binaries: | r-release: taxize_0.9.8.tgz, r-oldrel: taxize_0.9.8.tgz |
| Old sources: | taxize archive |
| Reverse depends: | aptg, MonoPhy |
| Reverse imports: | bdvis, brranching, camtrapR, metacoder, myTAI, originr, rusda, taxa, taxlist, taxotools, TR8, traitdataform, traits |
| Reverse suggests: | BIOMASS, EML, mapr, rbison, rnoaa, spocc |
| Reverse enhances: | rerddap |
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