Last updated on 2019-11-26 00:51:49 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.6.0 | 29.58 | 236.95 | 266.53 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.6.0 | 18.35 | 148.28 | 166.63 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.6.0 | 308.28 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.6.0 | 256.18 | OK | |||
| r-devel-windows-ix86+x86_64 | 0.6.0 | 85.00 | 501.00 | 586.00 | OK | |
| r-devel-windows-ix86+x86_64-gcc8 | 0.6.0 | 64.00 | 389.00 | 453.00 | OK | |
| r-patched-linux-x86_64 | 0.6.0 | 20.41 | 191.72 | 212.13 | OK | |
| r-patched-solaris-x86 | 0.6.0 | 429.10 | OK | |||
| r-release-linux-x86_64 | 0.6.0 | 18.94 | 196.69 | 215.63 | OK | |
| r-release-windows-ix86+x86_64 | 0.6.0 | 73.00 | 499.00 | 572.00 | OK | |
| r-release-osx-x86_64 | 0.6.0 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 0.6.0 | 43.00 | 490.00 | 533.00 | OK | |
| r-oldrel-osx-x86_64 | 0.6.0 | OK |
Version: 0.6.0
Check: tests
Result: ERROR
Running 'testthat.R' [158s/171s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(diceR)
>
> test_check("diceR")
-- 1. Error: No algorithms means all algorithms, output is an array (@test-conse
Argument data should be a list of numeric vectors or matrices, or factors
Backtrace:
1. diceR::consensus_cluster(hgsc, nk = 4, reps = 1, progress = FALSE)
5. purrr::pmap(list(fun, args), cc)
6. diceR:::.f(.l[[1L]][[i]], .l[[2L]][[i]], ...)
7. base::length(args$algs)
15. purrr::when(., . > 0 ~ purrr::invoke(fun, args), ~NULL)
16. [ base::eval(...) ] with 1 more call
21. diceR:::som(x, nk[k], xdim, ydim, rlen, alpha, hc.method)
22. purrr::when(., is.matrix(.) ~ ., ~as.matrix(.))
29. diceR:::som_train(., xdim = xdim, ydim = ydim, rlen = rlen, alpha = alpha)
30. kohonen::som(x, grid = grid, rlen = rlen, alpha = alpha)
31. kohonen::supersom(list(X), ...)
32. kohonen:::check.data(data)
Selecting k and imputing non-clustered cases
Computing consensus functions
Evaluating output with consensus function results
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Evaluating output with consensus function results
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Evaluating output with consensus function results
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Diverse Cluster Ensemble Completed
== testthat results ===========================================================
[ OK: 110 | SKIPPED: 0 | WARNINGS: 89 | FAILED: 1 ]
1. Error: No algorithms means all algorithms, output is an array (@test-consensus_cluster.R#7)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.6.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(diceR)
>
> test_check("diceR")
── 1. Error: No algorithms means all algorithms, output is an array (@test-conse
Argument data should be a list of numeric vectors or matrices, or factors
Backtrace:
1. diceR::consensus_cluster(hgsc, nk = 4, reps = 1, progress = FALSE)
5. purrr::pmap(list(fun, args), cc)
6. diceR:::.f(.l[[1L]][[i]], .l[[2L]][[i]], ...)
7. base::length(args$algs)
15. purrr::when(., . > 0 ~ purrr::invoke(fun, args), ~NULL)
16. [ base::eval(...) ] with 1 more call
21. diceR:::som(x, nk[k], xdim, ydim, rlen, alpha, hc.method)
22. purrr::when(., is.matrix(.) ~ ., ~as.matrix(.))
29. diceR:::som_train(., xdim = xdim, ydim = ydim, rlen = rlen, alpha = alpha)
30. kohonen::som(x, grid = grid, rlen = rlen, alpha = alpha)
31. kohonen::supersom(list(X), ...)
32. kohonen:::check.data(data)
Selecting k and imputing non-clustered cases
Computing consensus functions
Evaluating output with consensus function results
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Evaluating output with consensus function results
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Evaluating output with consensus function results
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Diverse Cluster Ensemble Completed
Selecting k and imputing non-clustered cases
Computing consensus functions
Diverse Cluster Ensemble Completed
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 110 | SKIPPED: 0 | WARNINGS: 89 | FAILED: 1 ]
1. Error: No algorithms means all algorithms, output is an array (@test-consensus_cluster.R#7)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc