Last updated on 2019-11-26 00:51:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 65.08 | 113.40 | 178.48 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 43.29 | 89.78 | 133.07 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 321.58 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 322.29 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.0.0 | 148.00 | 283.00 | 431.00 | OK | |
| r-devel-windows-ix86+x86_64-gcc8 | 1.0.0 | 120.00 | 254.00 | 374.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 53.25 | 195.95 | 249.20 | OK | |
| r-patched-solaris-x86 | 1.0.0 | 533.80 | OK | |||
| r-release-linux-x86_64 | 1.0.0 | 47.30 | 196.99 | 244.29 | OK | |
| r-release-windows-ix86+x86_64 | 1.0.0 | 133.00 | 227.00 | 360.00 | OK | |
| r-release-osx-x86_64 | 1.0.0 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0.0 | 88.00 | 303.00 | 391.00 | OK | |
| r-oldrel-osx-x86_64 | 1.0.0 | OK |
Version: 1.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [6s/7s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(intkrige)
Loading required package: sp
Loading required package: gstat
Loading required package: raster
>
> test_check("intkrige")
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
intkrige
--- call from context ---
`interval<-`(`*tmp*`, value = c(0.418365491995753, 1.47354134077123,
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0.831108310562077, 2.12816255383745, 2.11539992769514, 2.10963365047833,
2.76167684031925, 2.37871629631932, 0.985760370208604, 0.239825810051924,
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0.779541777163049, 1.32813148495833, 1.01324449648633, 0.952190223278335,
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1.14440994080356, 0.524673098279538, 1.21866001162954, 1.17504057512501,
1.10289895918835, 0.854889699448369, 2.02564538639023, 0.573979411108547,
0.265068646442383, 0.415465508931337, 0.902681693280644, 1.08814371836109,
1.1793797618874, 1.12329260082692, 2.17304280888567, 0.681789335130774,
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1.02952706723718, -0.191571898552905, 2.25713007645719, 2.32110383809599,
1.92039465510038, 1.33269248813733, 0.909664200081069, 1.69952184916625,
0.480330370178646, 1.19680345746866, 2.37996850669148, 1.72035623164475,
1.05516321243857, 0.878072629654312, 1.29047065336169, 1.04482800236919,
2.35916260580079, 0.559280931716504, 1.09503000789458, 3.08481163599712,
0.558147566967517, 1.73125664137665, 0.815621155800615, 0.96123222391557,
2.82383080085363, 1.4169074276135, 1.11146777489325, 1.77913460886195,
1.02105685516234, 1.23943938911009, 1.68832058231962, 0.487649204330305,
0.948202440622289, 1.97702762477577, 0.652991980726557, 1.08960299538868,
0.944726544613009, 2.13882526990733, 2.36252079782457, 2.03635203810681,
1.95923865148876, 2.38321059763039, 2.65796792248053, 0.434742447839765,
0.768420915377185, 2.85352061393806, 2.20249413521686, 1.98840063941439,
2.16277410697969, 2.3647621493964, 2.29856670005149, 3.28781342282218,
1.07886308273954, 1.78901236776204, 1.82472816773094, 0.843361400920166,
2.73914952641111, 0.90430012035187, 1.07291933807019, 2.19284959238498,
2.41556472897301, 0.717614659393543, 0.613327773739556, 1.56874270603156,
0.344303023545618, 2.32393633654675, 2.68780897364277, 1.05551104467561,
1.31597384250029, 1.60947241308156, 2.92937391707375, 3.06849111632904,
0.970580637810116, 1.39419600892722, 1.45236851509845, 2.87900340564011,
2.60823879610928, 1.17211719037378, 1.89579353206133, 0.669694919075565,
1.86672200344229, 1.32535094017338, 1.57292399592366, 0.259950256320573,
0.618347325939748, 0.66928741812925, 0.988399086565923, 2.21047752096232,
0.51300584583813, 1.11436946097306, 0.979586251807792, 1.55266385085409,
2.29328488538894, 1.49117155388504, 2.50078669602275, 1.21115246072218,
1.18637455664357, 2.12118465587983, 1.31911526017789, 2.25665740528514,
2.31768166835999, 2.7844881450174, 2.05141390473266, 1.11882234661836,
1.5186905313308, 0.668337165956597))
--- call from argument ---
if (class(value) == "character") {
if (length(value) != 2) {
stop("exactly two variable names are needed\n to define an interval")
}
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
if (class(x@data[, value[1]]) != "numeric" | class(x@data[,
value[2]]) != "numeric") {
stop("non-numeric input detected")
}
x@interval <- matrix(c(x@data[, value[1]], x@data[, value[2]]),
ncol = 2)
x@data[, value[1]] <- NULL
x@data[, value[2]] <- NULL
colnames(x@interval) <- c(value[1], value[2])
} else if (class(value) == "matrix") {
if (nrow(value) != nrow(coordinates(x@coords)) | ncol(value) !=
ncol(coordinates(x@coords))) {
stop("matrix dimensions must match the slot dimensions")
}
x@interval <- value
} else {
stop("'value' must be a vector of column names or a matrix")
}
--- R stacktrace ---
where 1: `interval<-`(`*tmp*`, value = c(0.418365491995753, 1.47354134077123,
-1.06524216887233, -0.207108774198838, 2.12231269411597, -0.194778741322678,
0.123174139527358, 0.775962341442271, -1.17988169217384, -1.68028069978435,
0.558758657953779, -1.55599018651476, 0.599204284966236, 0.213652169734108,
-0.990219190712315, 1.01940385890134, 1.39231937492117, 1.53879350541365,
-0.969559496990451, 0.928684363189913, 2.79125298133861, 2.06236715532859,
0.737648542807372, 2.03487400453048, -0.149435584442715, 2.12839980114353,
-1.96192361400655, 0.164772775574486, -1.26339856752628, 1.41315127340279,
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-0.36849674659894, 1.41960481776632, 2.18364334148044, 2.1464082762694,
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1.10289895918835, 0.854889699448369, 2.02564538639023, 0.573979411108547,
0.265068646442383, 0.415465508931337, 0.902681693280644, 1.08814371836109,
1.1793797618874, 1.12329260082692, 2.17304280888567, 0.681789335130774,
2.74497977448441, 0.313710315521848, 1.26243355100742, 2.43536679653822,
1.02952706723718, -0.191571898552905, 2.25713007645719, 2.32110383809599,
1.92039465510038, 1.33269248813733, 0.909664200081069, 1.69952184916625,
0.480330370178646, 1.19680345746866, 2.37996850669148, 1.72035623164475,
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0.768420915377185, 2.85352061393806, 2.20249413521686, 1.98840063941439,
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1.86672200344229, 1.32535094017338, 1.57292399592366, 0.259950256320573,
0.618347325939748, 0.66928741812925, 0.988399086565923, 2.21047752096232,
0.51300584583813, 1.11436946097306, 0.979586251807792, 1.55266385085409,
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1.18637455664357, 2.12118465587983, 1.31911526017789, 2.25665740528514,
2.31768166835999, 2.7844881450174, 2.05141390473266, 1.11882234661836,
1.5186905313308, 0.668337165956597))
where 2 at testthat/test_intkrige.R#22: `interval<-`(`*tmp*`, value = c(0.418365491995753, 1.47354134077123,
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1.55100439516724, 0.764460051015793, 1.46708015392338, 0.850151967532255,
1.09793299807262, 1.14113561947946, 2.29751302054737, 1.34797594546622,
0.865613015555012, 1.21696526078399, 1.02254459764346, 1.2700297288493,
0.779541777163049, 1.32813148495833, 1.01324449648633, 0.952190223278335,
1.82806576791411, 0.75147375043188, 0.268573653437645, 1.2842468275259,
1.14440994080356, 0.524673098279538, 1.21866001162954, 1.17504057512501,
1.10289895918835, 0.854889699448369, 2.02564538639023, 0.573979411108547,
0.265068646442383, 0.415465508931337, 0.902681693280644, 1.08814371836109,
1.1793797618874, 1.12329260082692, 2.17304280888567, 0.681789335130774,
2.74497977448441, 0.313710315521848, 1.26243355100742, 2.43536679653822,
1.02952706723718, -0.191571898552905, 2.25713007645719, 2.32110383809599,
1.92039465510038, 1.33269248813733, 0.909664200081069, 1.69952184916625,
0.480330370178646, 1.19680345746866, 2.37996850669148, 1.72035623164475,
1.05516321243857, 0.878072629654312, 1.29047065336169, 1.04482800236919,
2.35916260580079, 0.559280931716504, 1.09503000789458, 3.08481163599712,
0.558147566967517, 1.73125664137665, 0.815621155800615, 0.96123222391557,
2.82383080085363, 1.4169074276135, 1.11146777489325, 1.77913460886195,
1.02105685516234, 1.23943938911009, 1.68832058231962, 0.487649204330305,
0.948202440622289, 1.97702762477577, 0.652991980726557, 1.08960299538868,
0.944726544613009, 2.13882526990733, 2.36252079782457, 2.03635203810681,
1.95923865148876, 2.38321059763039, 2.65796792248053, 0.434742447839765,
0.768420915377185, 2.85352061393806, 2.20249413521686, 1.98840063941439,
2.16277410697969, 2.3647621493964, 2.29856670005149, 3.28781342282218,
1.07886308273954, 1.78901236776204, 1.82472816773094, 0.843361400920166,
2.73914952641111, 0.90430012035187, 1.07291933807019, 2.19284959238498,
2.41556472897301, 0.717614659393543, 0.613327773739556, 1.56874270603156,
0.344303023545618, 2.32393633654675, 2.68780897364277, 1.05551104467561,
1.31597384250029, 1.60947241308156, 2.92937391707375, 3.06849111632904,
0.970580637810116, 1.39419600892722, 1.45236851509845, 2.87900340564011,
2.60823879610928, 1.17211719037378, 1.89579353206133, 0.669694919075565,
1.86672200344229, 1.32535094017338, 1.57292399592366, 0.259950256320573,
0.618347325939748, 0.66928741812925, 0.988399086565923, 2.21047752096232,
0.51300584583813, 1.11436946097306, 0.979586251807792, 1.55266385085409,
2.29328488538894, 1.49117155388504, 2.50078669602275, 1.21115246072218,
1.18637455664357, 2.12118465587983, 1.31911526017789, 2.25665740528514,
2.31768166835999, 2.7844881450174, 2.05141390473266, 1.11882234661836,
1.5186905313308, 0.668337165956597))
where 3: eval(code, test_env)
where 4: eval(code, test_env)
where 5: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 6: doTryCatch(return(expr), name, parentenv, handler)
where 7: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 8: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 9: doTryCatch(return(expr), name, parentenv, handler)
where 10: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 11: tryCatchList(expr, classes, parentenv, handlers)
where 12: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 13: test_code(desc, code, env = parent.frame())
where 14 at testthat/test_intkrige.R#4: test_that("prediction for sample case is as expected", {
templocs <- data.frame(lat = 41.745, long = -111.81, ELEVATION = 1456)
sp::coordinates(templocs) <- c("long", "lat")
sp::proj4string(templocs) <- "+proj=longlat +ellps=WGS84\n +datum=WGS84 +no_defs +towgs84=0,0,0"
data(utsnow)
utsnow.sp <- utsnow
sp::coordinates(utsnow.sp) <- c("LONGITUDE", "LATITUDE")
sp::proj4string(utsnow.sp) <- sp::proj4string(templocs)
interval(utsnow.sp) <- c("minDL", "maxDL")
interval(utsnow.sp) <- log(interval(utsnow.sp))
temp_formulas <- list(center ~ ELEVATION, radius * (ELEVATION/median(ELEVATION)) ~
1)
varios <- intvariogram(utsnow.sp, formulas = temp_formulas)
varioFit <- fit.intvariogram(varios, models = gstat::vgm(c("Sph",
"Sph", "Gau")))
preds <- intkrige::intkrige(locations = utsnow.sp, newdata = templocs,
models = varioFit, formulas = temp_formulas)
target <- data.frame(lower = -0.0361, upper = 0.9703)
expect_equal(round(interval(preds), 4), as.matrix(target))
})
where 15: eval(code, test_env)
where 16: eval(code, test_env)
where 17: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 18: doTryCatch(return(expr), name, parentenv, handler)
where 19: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 20: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 21: doTryCatch(return(expr), name, parentenv, handler)
where 22: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 23: tryCatchList(expr, classes, parentenv, handlers)
where 24: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 25: test_code(NULL, exprs, env)
where 26: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 27: force(code)
where 28: doWithOneRestart(return(expr), restart)
where 29: withOneRestart(expr, restarts[[1L]])
where 30: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 31: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 32: FUN(X[[i]], ...)
where 33: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 34: force(code)
where 35: doWithOneRestart(return(expr), restart)
where 36: withOneRestart(expr, restarts[[1L]])
where 37: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 38: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 39: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 40: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 41: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_check("intkrige")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
Method Definition:
function (x, value)
{
if (is.null(value) | all(is.na(value))) {
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
x <- as(x, "SpatialPointsDataFrame")
return(x)
}
else if (class(value) == "character") {
if (length(value) != 2) {
stop("exactly two variable names are needed\n to define an interval")
}
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
if (class(x@data[, value[1]]) != "numeric" | class(x@data[,
value[2]]) != "numeric") {
stop("non-numeric input detected")
}
x@interval <- matrix(c(x@data[, value[1]], x@data[, value[2]]),
ncol = 2)
x@data[, value[1]] <- NULL
x@data[, value[2]] <- NULL
colnames(x@interval) <- c(value[1], value[2])
}
else if (class(value) == "matrix") {
if (nrow(value) != nrow(coordinates(x@coords)) | ncol(value) !=
ncol(coordinates(x@coords))) {
stop("matrix dimensions must match the slot dimensions")
}
x@interval <- value
}
else {
stop("'value' must be a vector of column names or a matrix")
}
if (any(x@interval[, 1] > x@interval[, 2])) {
stop("detected at least one lower endpoint\n greater than upper endpoint")
}
return(x)
}
<bytecode: 0x551d698>
<environment: namespace:intkrige>
Signatures:
x
target "intsp"
defined "intsp"
--- function search by body ---
S4 Method interval<-:intkrige defined in namespace intkrige with signature intsp has this body.
----------- END OF FAILURE REPORT --------------
Fatal error: the condition has length > 1
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building 'intkriging-workflow.Rmd' using rmarkdown
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
intkrige
--- call from context ---
`interval<-`(`*tmp*`, value = c(4.33217982783654, 4.21316396874786,
4.05882903821468, 4.31821539206891, 4.06002890215481, 4.28175592864488,
4.14902252693045, 4.28938037700111, 4.45073011525898, 4.10738078638217,
4.12961449162839, 4.21748414895893, 3.90062766363698, 4.1085586088862,
3.91181266265486, 3.99976958889747, 4.07579347503063, 4.15136347073487,
3.81026027178004, 3.96896272262243, 3.97311837055695, 3.90904736445526,
3.97574170211395, 3.83361471340459, 4.12525020260999, 4.13392859719358,
4.0174973397183, 4.36229136782735, 3.99126763186237, 3.85311364458008,
3.97097875187247, 4.09947695586539, 4.07557637100246, 3.95408376477466,
3.86125435545686, 4.26189103072331, 4.00692444444734, 3.98106666796507,
3.86260464466524, 4.35663022288955, 4.38421865210439, 4.31677728494241,
4.13585898976884, 4.45424235671911, 4.19505406138208, 4.32126040948688,
4.50070977181091, 4.15549008981506, 4.49913124472783, 4.31830215701782,
4.1935893564038, 2.42665616386025, 2.74174912309121, 3.92502746561371,
3.88442736290199, 3.71297545773819, 3.95808731144481, 4.02730717591409,
3.81465130752318, 4.12693352404207, 4.23964883672721, 3.81584944943091,
4.17326729813228, 4.187582793306, 3.91643226516045, 4.01815706378651,
3.76780853989852, 3.71211992378198, 4.14174837082472, 3.94819245543766,
3.79708522953851, 3.90297189394419, 3.74485044150587, 4.05862134033248,
4.26374344503814, 3.85702815963416, 3.66901714164898, 4.02761195131206,
4.01716268653702, 4.02044647597441, 3.7696578708199, 4.09278785733552,
2.59153485212745, 3.54338086050882, 3.47571434695011, 4.12192349519398,
3.21304340342202, 3.5521806804922, 3.71680250391935, 3.47338070228631,
1.63155258521308, 4.03680394904386, 2.78368093910275, 3.67815561586318,
3.49386735654529, 2.92859426892918, 4.04329619893411, 3.4863110616254,
3.63908395841057, 4.26698822103253, 4.30892005323653, 4.4926243130918,
4.39905269340602, 4.44071942055401, 4.51938739152626, 4.50106842807874,
4.47045750026273, 4.26968522329686, 4.38650803095586, 4.41515942258358,
4.33608187015765, 3.60822110055523, 4.16570883266853, 3.99720691920075,
4.0107167906813, 3.94616923502509, 3.79405992929561, 3.92441415602965,
4.27451096554972, 4.05714548683387, 4.08719672008373, 4.11079446340366,
3.83823884547571, 4.28827546616719, 4.17182323564793, 3.89425859929745,
4.17636791863717, 4.06813516009082, 3.17727590896819, 3.98833248004467,
3.9324731007872, 4.05330870914499, 3.73972380819812, 3.836968735987,
3.80645891763142, 4.20831909819201, 4.47960676524771, 4.28053239741592,
4.34849664189872, 4.10518604573432, 4.48412255191609, 3.66396605298537,
4.18608296696907, 4.30195516673641, 4.59010587610666, 4.15647737036743,
3.92846975112189, 3.81664477285207, 3.92280470073023, 3.9386554909517,
4.44867073059151, 4.27974950522396, 4.26499089486628, 4.14291007024306,
4.38893208490232, 4.19076294844952, 4.38667190021942, 4.48882891008718,
4.00118190810347, 4.0485404094379, 4.0700459078587, 5.28181863583495,
5.19683710668685, 5.18509087318455, 5.28381687957281, 5.13729208605825,
5.25646025815053, 5.18533965449842, 5.29205824452895, 5.29698566476211,
5.12741849371852, 5.13161117766937, 5.21504933652221, 5.05658284453837,
5.21994059700452, 5.10711006892037, 5.11978518715518, 5.1537405236136,
5.16713400221745, 5.09038457432557, 5.12460299941916, 5.10347932432947,
5.1104836964841, 5.16768481632567, 5.10000430759972, 5.2350761291015,
5.25941551856322, 5.14783764048767, 5.27745438298709, 5.1294472270992,
5.07405909392304, 5.13778076684614, 5.1781197144492, 5.25281241799254,
5.19053450505335, 5.0872579603039, 5.24767163572529, 5.11447307707304,
5.14097598267349, 5.09989078184461, 5.30518814084701, 5.34786766630723,
5.26985388411388, 5.30411843463448, 5.34786426080421, 5.33295355497722,
5.31349083394709, 5.35921292891882, 5.30876295597388, 5.32855812460508,
5.29245350166334, 5.24591201196347, 4.88920392236548, 4.88619484011897,
5.09596772324307, 5.18117157775244, 5.14840087857546, 5.08458559769531,
5.18217219134197, 5.06092336636175, 5.21341676377601, 5.18225291149474,
5.13800588357794, 5.234912499785, 5.29509535874894, 5.0944288168259,
5.16737326975868, 5.00961144951833, 5.04148641634894, 5.21883298259491,
5.12150711855914, 5.12413075654839, 5.14637874615925, 5.18187068483276,
5.18890404043622, 5.27483916801434, 5.09588236978635, 5.08842291593328,
5.25213668337199, 5.18423796228521, 5.16862831223972, 5.06362924415463,
5.16005754177796, 4.93107033194026, 5.07140959874241, 5.11164934687381,
5.20303266828226, 5.03548937078404, 5.10180556909374, 5.10630867159093,
5.00733303041308, 4.89995385231163, 5.12451282858476, 4.9998275248928,
5.11556387392389, 5.06974429991514, 4.9943294179463, 5.17390534736359,
5.0118649410573, 5.15409516491327, 5.27169484034679, 5.38082185133642,
5.37533012644843, 5.33845428761326, 5.37133335702072, 5.38641227297884,
5.37838442156117, 5.31981367001254, 5.33668948656324, 5.37717917001142,
5.32510753822487, 5.40404454310192, 5.09108778906081, 5.30023626797339,
5.21817187527419, 5.21919823804696, 5.21847999164694, 5.16782321615654,
5.1993671650545, 5.22294476439076, 5.20098397712863, 5.27411980762093,
5.25442310894233, 5.18413390310191, 5.27335256483966, 5.30704093874769,
5.20226925985556, 5.11758745701273, 5.28529073635936, 4.71176161970905,
5.24987644538491, 5.14998909619304, 5.27480748085683, 4.97222202793221,
5.20467191718163, 5.23536592096326, 5.2682112771898, 5.3190528173701,
5.12738527610333, 5.25237304226676, 5.11567776255035, 5.26521359719198,
5.13853830263968, 5.1658797209383, 5.26304542449425, 5.37611885450575,
5.14618199471878, 5.06194408779695, 5.02412471387861, 5.02378617316784,
5.04748946497678, 5.35046081416237, 5.23824772748714, 5.19435760792557,
5.12385232955331, 5.2796766061142, 5.15270752566062, 5.22712636869643,
5.2874198613428, 5.139046547993, 5.09046421263196, 5.10202437264807
))
--- call from argument ---
if (class(value) == "character") {
if (length(value) != 2) {
stop("exactly two variable names are needed\n to define an interval")
}
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
if (class(x@data[, value[1]]) != "numeric" | class(x@data[,
value[2]]) != "numeric") {
stop("non-numeric input detected")
}
x@interval <- matrix(c(x@data[, value[1]], x@data[, value[2]]),
ncol = 2)
x@data[, value[1]] <- NULL
x@data[, value[2]] <- NULL
colnames(x@interval) <- c(value[1], value[2])
} else if (class(value) == "matrix") {
if (nrow(value) != nrow(coordinates(x@coords)) | ncol(value) !=
ncol(coordinates(x@coords))) {
stop("matrix dimensions must match the slot dimensions")
}
x@interval <- value
} else {
stop("'value' must be a vector of column names or a matrix")
}
--- R stacktrace ---
where 1: `interval<-`(`*tmp*`, value = c(4.33217982783654, 4.21316396874786,
4.05882903821468, 4.31821539206891, 4.06002890215481, 4.28175592864488,
4.14902252693045, 4.28938037700111, 4.45073011525898, 4.10738078638217,
4.12961449162839, 4.21748414895893, 3.90062766363698, 4.1085586088862,
3.91181266265486, 3.99976958889747, 4.07579347503063, 4.15136347073487,
3.81026027178004, 3.96896272262243, 3.97311837055695, 3.90904736445526,
3.97574170211395, 3.83361471340459, 4.12525020260999, 4.13392859719358,
4.0174973397183, 4.36229136782735, 3.99126763186237, 3.85311364458008,
3.97097875187247, 4.09947695586539, 4.07557637100246, 3.95408376477466,
3.86125435545686, 4.26189103072331, 4.00692444444734, 3.98106666796507,
3.86260464466524, 4.35663022288955, 4.38421865210439, 4.31677728494241,
4.13585898976884, 4.45424235671911, 4.19505406138208, 4.32126040948688,
4.50070977181091, 4.15549008981506, 4.49913124472783, 4.31830215701782,
4.1935893564038, 2.42665616386025, 2.74174912309121, 3.92502746561371,
3.88442736290199, 3.71297545773819, 3.95808731144481, 4.02730717591409,
3.81465130752318, 4.12693352404207, 4.23964883672721, 3.81584944943091,
4.17326729813228, 4.187582793306, 3.91643226516045, 4.01815706378651,
3.76780853989852, 3.71211992378198, 4.14174837082472, 3.94819245543766,
3.79708522953851, 3.90297189394419, 3.74485044150587, 4.05862134033248,
4.26374344503814, 3.85702815963416, 3.66901714164898, 4.02761195131206,
4.01716268653702, 4.02044647597441, 3.7696578708199, 4.09278785733552,
2.59153485212745, 3.54338086050882, 3.47571434695011, 4.12192349519398,
3.21304340342202, 3.5521806804922, 3.71680250391935, 3.47338070228631,
1.63155258521308, 4.03680394904386, 2.78368093910275, 3.67815561586318,
3.49386735654529, 2.92859426892918, 4.04329619893411, 3.4863110616254,
3.63908395841057, 4.26698822103253, 4.30892005323653, 4.4926243130918,
4.39905269340602, 4.44071942055401, 4.51938739152626, 4.50106842807874,
4.47045750026273, 4.26968522329686, 4.38650803095586, 4.41515942258358,
4.33608187015765, 3.60822110055523, 4.16570883266853, 3.99720691920075,
4.0107167906813, 3.94616923502509, 3.79405992929561, 3.92441415602965,
4.27451096554972, 4.05714548683387, 4.08719672008373, 4.11079446340366,
3.83823884547571, 4.28827546616719, 4.17182323564793, 3.89425859929745,
4.17636791863717, 4.06813516009082, 3.17727590896819, 3.98833248004467,
3.9324731007872, 4.05330870914499, 3.73972380819812, 3.836968735987,
3.80645891763142, 4.20831909819201, 4.47960676524771, 4.28053239741592,
4.34849664189872, 4.10518604573432, 4.48412255191609, 3.66396605298537,
4.18608296696907, 4.30195516673641, 4.59010587610666, 4.15647737036743,
3.92846975112189, 3.81664477285207, 3.92280470073023, 3.9386554909517,
4.44867073059151, 4.27974950522396, 4.26499089486628, 4.14291007024306,
4.38893208490232, 4.19076294844952, 4.38667190021942, 4.48882891008718,
4.00118190810347, 4.0485404094379, 4.0700459078587, 5.28181863583495,
5.19683710668685, 5.18509087318455, 5.28381687957281, 5.13729208605825,
5.25646025815053, 5.18533965449842, 5.29205824452895, 5.29698566476211,
5.12741849371852, 5.13161117766937, 5.21504933652221, 5.05658284453837,
5.21994059700452, 5.10711006892037, 5.11978518715518, 5.1537405236136,
5.16713400221745, 5.09038457432557, 5.12460299941916, 5.10347932432947,
5.1104836964841, 5.16768481632567, 5.10000430759972, 5.2350761291015,
5.25941551856322, 5.14783764048767, 5.27745438298709, 5.1294472270992,
5.07405909392304, 5.13778076684614, 5.1781197144492, 5.25281241799254,
5.19053450505335, 5.0872579603039, 5.24767163572529, 5.11447307707304,
5.14097598267349, 5.09989078184461, 5.30518814084701, 5.34786766630723,
5.26985388411388, 5.30411843463448, 5.34786426080421, 5.33295355497722,
5.31349083394709, 5.35921292891882, 5.30876295597388, 5.32855812460508,
5.29245350166334, 5.24591201196347, 4.88920392236548, 4.88619484011897,
5.09596772324307, 5.18117157775244, 5.14840087857546, 5.08458559769531,
5.18217219134197, 5.06092336636175, 5.21341676377601, 5.18225291149474,
5.13800588357794, 5.234912499785, 5.29509535874894, 5.0944288168259,
5.16737326975868, 5.00961144951833, 5.04148641634894, 5.21883298259491,
5.12150711855914, 5.12413075654839, 5.14637874615925, 5.18187068483276,
5.18890404043622, 5.27483916801434, 5.09588236978635, 5.08842291593328,
5.25213668337199, 5.18423796228521, 5.16862831223972, 5.06362924415463,
5.16005754177796, 4.93107033194026, 5.07140959874241, 5.11164934687381,
5.20303266828226, 5.03548937078404, 5.10180556909374, 5.10630867159093,
5.00733303041308, 4.89995385231163, 5.12451282858476, 4.9998275248928,
5.11556387392389, 5.06974429991514, 4.9943294179463, 5.17390534736359,
5.0118649410573, 5.15409516491327, 5.27169484034679, 5.38082185133642,
5.37533012644843, 5.33845428761326, 5.37133335702072, 5.38641227297884,
5.37838442156117, 5.31981367001254, 5.33668948656324, 5.37717917001142,
5.32510753822487, 5.40404454310192, 5.09108778906081, 5.30023626797339,
5.21817187527419, 5.21919823804696, 5.21847999164694, 5.16782321615654,
5.1993671650545, 5.22294476439076, 5.20098397712863, 5.27411980762093,
5.25442310894233, 5.18413390310191, 5.27335256483966, 5.30704093874769,
5.20226925985556, 5.11758745701273, 5.28529073635936, 4.71176161970905,
5.24987644538491, 5.14998909619304, 5.27480748085683, 4.97222202793221,
5.20467191718163, 5.23536592096326, 5.2682112771898, 5.3190528173701,
5.12738527610333, 5.25237304226676, 5.11567776255035, 5.26521359719198,
5.13853830263968, 5.1658797209383, 5.26304542449425, 5.37611885450575,
5.14618199471878, 5.06194408779695, 5.02412471387861, 5.02378617316784,
5.04748946497678, 5.35046081416237, 5.23824772748714, 5.19435760792557,
5.12385232955331, 5.2796766061142, 5.15270752566062, 5.22712636869643,
5.2874198613428, 5.139046547993, 5.09046421263196, 5.10202437264807
))
where 2: `interval<-`(`*tmp*`, value = c(4.33217982783654, 4.21316396874786,
4.05882903821468, 4.31821539206891, 4.06002890215481, 4.28175592864488,
4.14902252693045, 4.28938037700111, 4.45073011525898, 4.10738078638217,
4.12961449162839, 4.21748414895893, 3.90062766363698, 4.1085586088862,
3.91181266265486, 3.99976958889747, 4.07579347503063, 4.15136347073487,
3.81026027178004, 3.96896272262243, 3.97311837055695, 3.90904736445526,
3.97574170211395, 3.83361471340459, 4.12525020260999, 4.13392859719358,
4.0174973397183, 4.36229136782735, 3.99126763186237, 3.85311364458008,
3.97097875187247, 4.09947695586539, 4.07557637100246, 3.95408376477466,
3.86125435545686, 4.26189103072331, 4.00692444444734, 3.98106666796507,
3.86260464466524, 4.35663022288955, 4.38421865210439, 4.31677728494241,
4.13585898976884, 4.45424235671911, 4.19505406138208, 4.32126040948688,
4.50070977181091, 4.15549008981506, 4.49913124472783, 4.31830215701782,
4.1935893564038, 2.42665616386025, 2.74174912309121, 3.92502746561371,
3.88442736290199, 3.71297545773819, 3.95808731144481, 4.02730717591409,
3.81465130752318, 4.12693352404207, 4.23964883672721, 3.81584944943091,
4.17326729813228, 4.187582793306, 3.91643226516045, 4.01815706378651,
3.76780853989852, 3.71211992378198, 4.14174837082472, 3.94819245543766,
3.79708522953851, 3.90297189394419, 3.74485044150587, 4.05862134033248,
4.26374344503814, 3.85702815963416, 3.66901714164898, 4.02761195131206,
4.01716268653702, 4.02044647597441, 3.7696578708199, 4.09278785733552,
2.59153485212745, 3.54338086050882, 3.47571434695011, 4.12192349519398,
3.21304340342202, 3.5521806804922, 3.71680250391935, 3.47338070228631,
1.63155258521308, 4.03680394904386, 2.78368093910275, 3.67815561586318,
3.49386735654529, 2.92859426892918, 4.04329619893411, 3.4863110616254,
3.63908395841057, 4.26698822103253, 4.30892005323653, 4.4926243130918,
4.39905269340602, 4.44071942055401, 4.51938739152626, 4.50106842807874,
4.47045750026273, 4.26968522329686, 4.38650803095586, 4.41515942258358,
4.33608187015765, 3.60822110055523, 4.16570883266853, 3.99720691920075,
4.0107167906813, 3.94616923502509, 3.79405992929561, 3.92441415602965,
4.27451096554972, 4.05714548683387, 4.08719672008373, 4.11079446340366,
3.83823884547571, 4.28827546616719, 4.17182323564793, 3.89425859929745,
4.17636791863717, 4.06813516009082, 3.17727590896819, 3.98833248004467,
3.9324731007872, 4.05330870914499, 3.73972380819812, 3.836968735987,
3.80645891763142, 4.20831909819201, 4.47960676524771, 4.28053239741592,
4.34849664189872, 4.10518604573432, 4.48412255191609, 3.66396605298537,
4.18608296696907, 4.30195516673641, 4.59010587610666, 4.15647737036743,
3.92846975112189, 3.81664477285207, 3.92280470073023, 3.9386554909517,
4.44867073059151, 4.27974950522396, 4.26499089486628, 4.14291007024306,
4.38893208490232, 4.19076294844952, 4.38667190021942, 4.48882891008718,
4.00118190810347, 4.0485404094379, 4.0700459078587, 5.28181863583495,
5.19683710668685, 5.18509087318455, 5.28381687957281, 5.13729208605825,
5.25646025815053, 5.18533965449842, 5.29205824452895, 5.29698566476211,
5.12741849371852, 5.13161117766937, 5.21504933652221, 5.05658284453837,
5.21994059700452, 5.10711006892037, 5.11978518715518, 5.1537405236136,
5.16713400221745, 5.09038457432557, 5.12460299941916, 5.10347932432947,
5.1104836964841, 5.16768481632567, 5.10000430759972, 5.2350761291015,
5.25941551856322, 5.14783764048767, 5.27745438298709, 5.1294472270992,
5.07405909392304, 5.13778076684614, 5.1781197144492, 5.25281241799254,
5.19053450505335, 5.0872579603039, 5.24767163572529, 5.11447307707304,
5.14097598267349, 5.09989078184461, 5.30518814084701, 5.34786766630723,
5.26985388411388, 5.30411843463448, 5.34786426080421, 5.33295355497722,
5.31349083394709, 5.35921292891882, 5.30876295597388, 5.32855812460508,
5.29245350166334, 5.24591201196347, 4.88920392236548, 4.88619484011897,
5.09596772324307, 5.18117157775244, 5.14840087857546, 5.08458559769531,
5.18217219134197, 5.06092336636175, 5.21341676377601, 5.18225291149474,
5.13800588357794, 5.234912499785, 5.29509535874894, 5.0944288168259,
5.16737326975868, 5.00961144951833, 5.04148641634894, 5.21883298259491,
5.12150711855914, 5.12413075654839, 5.14637874615925, 5.18187068483276,
5.18890404043622, 5.27483916801434, 5.09588236978635, 5.08842291593328,
5.25213668337199, 5.18423796228521, 5.16862831223972, 5.06362924415463,
5.16005754177796, 4.93107033194026, 5.07140959874241, 5.11164934687381,
5.20303266828226, 5.03548937078404, 5.10180556909374, 5.10630867159093,
5.00733303041308, 4.89995385231163, 5.12451282858476, 4.9998275248928,
5.11556387392389, 5.06974429991514, 4.9943294179463, 5.17390534736359,
5.0118649410573, 5.15409516491327, 5.27169484034679, 5.38082185133642,
5.37533012644843, 5.33845428761326, 5.37133335702072, 5.38641227297884,
5.37838442156117, 5.31981367001254, 5.33668948656324, 5.37717917001142,
5.32510753822487, 5.40404454310192, 5.09108778906081, 5.30023626797339,
5.21817187527419, 5.21919823804696, 5.21847999164694, 5.16782321615654,
5.1993671650545, 5.22294476439076, 5.20098397712863, 5.27411980762093,
5.25442310894233, 5.18413390310191, 5.27335256483966, 5.30704093874769,
5.20226925985556, 5.11758745701273, 5.28529073635936, 4.71176161970905,
5.24987644538491, 5.14998909619304, 5.27480748085683, 4.97222202793221,
5.20467191718163, 5.23536592096326, 5.2682112771898, 5.3190528173701,
5.12738527610333, 5.25237304226676, 5.11567776255035, 5.26521359719198,
5.13853830263968, 5.1658797209383, 5.26304542449425, 5.37611885450575,
5.14618199471878, 5.06194408779695, 5.02412471387861, 5.02378617316784,
5.04748946497678, 5.35046081416237, 5.23824772748714, 5.19435760792557,
5.12385232955331, 5.2796766061142, 5.15270752566062, 5.22712636869643,
5.2874198613428, 5.139046547993, 5.09046421263196, 5.10202437264807
))
where 3: eval(expr, envir, enclos)
where 4: eval(expr, envir, enclos)
where 5: withVisible(eval(expr, envir, enclos))
where 6: withCallingHandlers(withVisible(eval(expr, envir, enclos)), warning = wHandler,
error = eHandler, message = mHandler)
where 7: handle(ev <- withCallingHandlers(withVisible(eval(expr, envir,
enclos)), warning = wHandler, error = eHandler, message = mHandler))
where 8: timing_fn(handle(ev <- withCallingHandlers(withVisible(eval(expr,
envir, enclos)), warning = wHandler, error = eHandler, message = mHandler)))
where 9: evaluate_call(expr, parsed$src[[i]], envir = envir, enclos = enclos,
debug = debug, last = i == length(out), use_try = stop_on_error !=
2L, keep_warning = keep_warning, keep_message = keep_message,
output_handler = output_handler, include_timing = include_timing)
where 10: evaluate::evaluate(...)
where 11: evaluate(code, envir = env, new_device = FALSE, keep_warning = !isFALSE(options$warning),
keep_message = !isFALSE(options$message), stop_on_error = if (options$error &&
options$include) 0L else 2L, output_handler = knit_handlers(options$render,
options))
where 12: in_dir(input_dir(), evaluate(code, envir = env, new_device = FALSE,
keep_warning = !isFALSE(options$warning), keep_message = !isFALSE(options$message),
stop_on_error = if (options$error && options$include) 0L else 2L,
output_handler = knit_handlers(options$render, options)))
where 13: block_exec(params)
where 14: call_block(x)
where 15: process_group.block(group)
where 16: process_group(group)
where 17: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),
error = function(e) {
setwd(wd)
cat(res, sep = "\n", file = output %n% "")
message("Quitting from lines ", paste(current_lines(i),
collapse = "-"), " (", knit_concord$get("infile"),
") ")
})
where 18: process_file(text, output)
where 19: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet,
encoding = encoding)
where 20: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(),
...)
where 21: vweave_rmarkdown(...)
where 22: engine$weave(file, quiet = quiet, encoding = enc)
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch({
engine$weave(file, quiet = quiet, encoding = enc)
setwd(startdir)
output <- find_vignette_product(name, by = "weave", engine = engine)
if (!have.makefile && vignette_is_tex(output)) {
texi2pdf(file = output, clean = FALSE, quiet = quiet)
output <- find_vignette_product(name, by = "texi2pdf",
engine = engine)
}
outputs <- c(outputs, output)
}, error = function(e) {
thisOK <<- FALSE
fails <<- c(fails, file)
message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s",
file, conditionMessage(e)))
})
where 27: tools:::buildVignettes(dir = "/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/intkrige.Rcheck/vign_test/intkrige",
ser_elibs = "/tmp/RtmpLO3Gzl/file691a49495bf0.rds")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
Method Definition:
function (x, value)
{
if (is.null(value) | all(is.na(value))) {
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
x <- as(x, "SpatialPointsDataFrame")
return(x)
}
else if (class(value) == "character") {
if (length(value) != 2) {
stop("exactly two variable names are needed\n to define an interval")
}
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
if (class(x@data[, value[1]]) != "numeric" | class(x@data[,
value[2]]) != "numeric") {
stop("non-numeric input detected")
}
x@interval <- matrix(c(x@data[, value[1]], x@data[, value[2]]),
ncol = 2)
x@data[, value[1]] <- NULL
x@data[, value[2]] <- NULL
colnames(x@interval) <- c(value[1], value[2])
}
else if (class(value) == "matrix") {
if (nrow(value) != nrow(coordinates(x@coords)) | ncol(value) !=
ncol(coordinates(x@coords))) {
stop("matrix dimensions must match the slot dimensions")
}
x@interval <- value
}
else {
stop("'value' must be a vector of column names or a matrix")
}
if (any(x@interval[, 1] > x@interval[, 2])) {
stop("detected at least one lower endpoint\n greater than upper endpoint")
}
return(x)
}
<bytecode: 0x8784300>
<environment: namespace:intkrige>
Signatures:
x
target "intsp"
defined "intsp"
--- function search by body ---
S4 Method interval<-:intkrige defined in namespace intkrige with signature intsp has this body.
----------- END OF FAILURE REPORT --------------
Fatal error: the condition has length > 1
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [5s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(intkrige)
Loading required package: sp
Loading required package: gstat
Loading required package: raster
>
> test_check("intkrige")
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
intkrige
--- call from context ---
`interval<-`(`*tmp*`, value = c(0.418365491995753, 1.47354134077123,
-1.06524216887233, -0.207108774198838, 2.12231269411597, -0.194778741322678,
0.123174139527358, 0.775962341442271, -1.17988169217384, -1.68028069978435,
0.558758657953779, -1.55599018651476, 0.599204284966236, 0.213652169734108,
-0.990219190712315, 1.01940385890134, 1.39231937492117, 1.53879350541365,
-0.969559496990451, 0.928684363189913, 2.79125298133861, 2.06236715532859,
0.737648542807372, 2.03487400453048, -0.149435584442715, 2.12839980114353,
-1.96192361400655, 0.164772775574486, -1.26339856752628, 1.41315127340279,
-0.666760539964297, -0.294253162806982, 1.93617670621501, -1.83987264225306,
-0.53853050893861, 1.62225800825558, 0.455883679766254, 2.07033320969072,
-0.0746230356589374, -0.239342808015821, 1.72177399262858, 1.89040864719993,
-0.36849674659894, 1.41960481776632, 2.18364334148044, 2.1464082762694,
-0.820028283074765, 0.462807534815575, 0.89921320096277, 1.99441983880998,
-1.27260680221617, 2.08040087496988, -1.67022500372054, -1.07136302154692,
-1.12677222244004, -1.08523953204977, -0.699368730404234, 1.85825681864222,
-2.13229029444346, -0.873227926734017, -1.13617433044915, -0.981353566579604,
1.85079528616295, -0.832101341373186, -1.28952785954492, 1.85556290971558,
-0.873513355859051, -1.75772144575181, -0.251826419452495, -0.865346300283381,
-0.950800333405811, -0.502530689431868, 0.297071761374247, 2.27370683970852,
1.75071299367405, 1.85807814847575, -0.928777758065737, -1.46499583032732,
0.696073376358676, 1.47363871020412, 1.97111336176914, 1.67278837791385,
-1.07998947542987, -0.031943792155881, -0.138695886275996, -0.344913149836555,
-0.412815678895716, -1.20328823094169, -0.853098264294005, 1.9448854532161,
2.24438638749028, -1.00616285828811, -0.319862423729654, -0.848857663336077,
2.1032114195956, 0.113527954701262, 1.52109490176278, 0.170589305957997,
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1.5186905313308, 0.668337165956597))
--- call from argument ---
if (class(value) == "character") {
if (length(value) != 2) {
stop("exactly two variable names are needed\n to define an interval")
}
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
if (class(x@data[, value[1]]) != "numeric" | class(x@data[,
value[2]]) != "numeric") {
stop("non-numeric input detected")
}
x@interval <- matrix(c(x@data[, value[1]], x@data[, value[2]]),
ncol = 2)
x@data[, value[1]] <- NULL
x@data[, value[2]] <- NULL
colnames(x@interval) <- c(value[1], value[2])
} else if (class(value) == "matrix") {
if (nrow(value) != nrow(coordinates(x@coords)) | ncol(value) !=
ncol(coordinates(x@coords))) {
stop("matrix dimensions must match the slot dimensions")
}
x@interval <- value
} else {
stop("'value' must be a vector of column names or a matrix")
}
--- R stacktrace ---
where 1: `interval<-`(`*tmp*`, value = c(0.418365491995753, 1.47354134077123,
-1.06524216887233, -0.207108774198838, 2.12231269411597, -0.194778741322678,
0.123174139527358, 0.775962341442271, -1.17988169217384, -1.68028069978435,
0.558758657953779, -1.55599018651476, 0.599204284966236, 0.213652169734108,
-0.990219190712315, 1.01940385890134, 1.39231937492117, 1.53879350541365,
-0.969559496990451, 0.928684363189913, 2.79125298133861, 2.06236715532859,
0.737648542807372, 2.03487400453048, -0.149435584442715, 2.12839980114353,
-1.96192361400655, 0.164772775574486, -1.26339856752628, 1.41315127340279,
-0.666760539964297, -0.294253162806982, 1.93617670621501, -1.83987264225306,
-0.53853050893861, 1.62225800825558, 0.455883679766254, 2.07033320969072,
-0.0746230356589374, -0.239342808015821, 1.72177399262858, 1.89040864719993,
-0.36849674659894, 1.41960481776632, 2.18364334148044, 2.1464082762694,
-0.820028283074765, 0.462807534815575, 0.89921320096277, 1.99441983880998,
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1.64347123311376, 1.09418009087711, 1.21140925363152, 1.65433260660447,
2.84111537711711, -0.559833683147634, 0.781669250930161, 0.347370043205719,
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1.89882280450856, 1.9494545577035, -0.948933073024751, -0.649007361003127,
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2.6648875360456, -0.11974750677845, -0.218899551849425, -0.0695971696394982,
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1.65307409919729, -0.851480559283787, -1.02236394937324, -0.845360634710315,
0.111186113202561, 1.79416239320865, 0.289836504928517, 1.98223992001175,
-0.544260537134924, -0.397371862789191, 1.64994330002405, -0.357233296749463,
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2.1177929917693, 0.863706184430119, 1.00962617993582, 3.16772987150097,
1.37536599170859, 1.47110786422734, 2.23350878943605, 1.1722873525231,
0.471633324879371, 2.08611443167994, 0.268770896127598, 1.6768505777751,
2.49919305904685, 1.12406294493114, 1.95618998779844, 2.001485917774,
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2.670962705118, 1.82323188570934, 2.45666879960537, 1.12733634361778,
2.5225688481315, 0.303424072469255, 1.69793939588374, 0.85127059251302,
1.82498114233518, 0.813308586320079, 1.3233932884498, 3.0282589247402,
0.338740609696066, 1.75422178254152, 2.62120737459009, 1.80303408436185,
2.61557871979231, 1.41961732869874, 1.06633555945076, 2.17048699551976,
3.25299606897465, 1.14770795677851, 2.48181572064082, 2.58991052635453,
2.52729633295582, 1.19878929420149, 2.52013832381491, 2.0766954307907,
2.42327659474327, 0.539056141314171, 2.5026259555724, 0.701080893661786,
0.538292258765673, 0.730008889479201, 0.560222414725861, 0.969343548126293,
2.4017435948683, 0.045905090038999, 0.622319420345187, 0.48954369002679,
0.719288495553191, 2.48969399230556, 0.878528608076333, 0.513322178808632,
2.30762893167647, 1.25292521451759, 0.57415379359688, 1.02711532680236,
0.756965875198513, 0.788878919158999, 1.08118529427865, 1.55789080634381,
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0.209505400454722, 1.89814659905884, 2.11280079180466, 2.41793039025514,
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0.588049419395028, 2.45079035132267, 1.18183090497788, 2.17650424399,
1.75065809752429, 2.46558771801654, 1.59559954767978, 0.377501880288854,
1.18549152380943, 1.3190330992778, 2.24582987776818, 1.15065413469479,
1.09350606005814, 1.41076735119833, 1.59932233739064, 2.23732209930335,
1.57323960967701, 0.511443644528819, 2.65463455968009, 2.02625257342311,
1.05290589162184, 0.631515603976944, 1.70931652423155, 0.96453589291106,
2.13540900620897, 1.10461819457294, 0.946788550264758, 2.79632211247022,
0.832378526604231, 1.1633921782598, 1.37543571681952, 1.18916202023181,
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0.601462987711984, 0.356689046703278, 1.12618549297071, 1.15180724836055,
1.28946654067007, 0.573170565083053, 0.870804475454833, 2.2244186238024,
1.45324283767525, 2.11397982678782, 1.86652894998056, 1.16660575077499,
2.94738832504411, 1.21258615968114, 1.03580489399709, 0.783836022867922,
-0.0153954958051567, 0.814770764574372, 1.6968462993409, 2.62065848427132,
2.15406755091906, 1.32305624267071, 2.01333980563128, -0.0673750082895199,
0.90104214310933, 1.2889763774775, 2.8268254210741, 1.96539643982094,
2.19332457256186, 2.25809205303973, 1.13113321895444, 0.887406589741054,
2.13698634987261, 1.05586595294042, 1.16580954294559, 1.04327552093333,
0.831108310562077, 2.12816255383745, 2.11539992769514, 2.10963365047833,
2.76167684031925, 2.37871629631932, 0.985760370208604, 0.239825810051924,
1.52372201808274, 2.31601320131684, 1.502543152924, 0.682366163546633,
1.82992189580218, 2.5530652523951, 0.992263410199755, 1.59779415193819,
2.31511280841597, 0.682342809402338, 0.634759065593926, 0.685930819882531,
1.40075724226517, 1.09024020733745, 0.594846921476172, 1.12194859865682,
1.15606759245717, 2.02822135577952, 2.3313347089676, 1.60130899209096,
1.74036132858252, -0.0635724295791441, 2.94315516535086, 1.08424139663346,
2.67747252942974, 0.984189602409169, 2.4915047548276, 0.61894661203433,
0.747052953621296, 2.83161490985122, 1.65535717693601, 2.08522483064736,
1.55100439516724, 0.764460051015793, 1.46708015392338, 0.850151967532255,
1.09793299807262, 1.14113561947946, 2.29751302054737, 1.34797594546622,
0.865613015555012, 1.21696526078399, 1.02254459764346, 1.2700297288493,
0.779541777163049, 1.32813148495833, 1.01324449648633, 0.952190223278335,
1.82806576791411, 0.75147375043188, 0.268573653437645, 1.2842468275259,
1.14440994080356, 0.524673098279538, 1.21866001162954, 1.17504057512501,
1.10289895918835, 0.854889699448369, 2.02564538639023, 0.573979411108547,
0.265068646442383, 0.415465508931337, 0.902681693280644, 1.08814371836109,
1.1793797618874, 1.12329260082692, 2.17304280888567, 0.681789335130774,
2.74497977448441, 0.313710315521848, 1.26243355100742, 2.43536679653822,
1.02952706723718, -0.191571898552905, 2.25713007645719, 2.32110383809599,
1.92039465510038, 1.33269248813733, 0.909664200081069, 1.69952184916625,
0.480330370178646, 1.19680345746866, 2.37996850669148, 1.72035623164475,
1.05516321243857, 0.878072629654312, 1.29047065336169, 1.04482800236919,
2.35916260580079, 0.559280931716504, 1.09503000789458, 3.08481163599712,
0.558147566967517, 1.73125664137665, 0.815621155800615, 0.96123222391557,
2.82383080085363, 1.4169074276135, 1.11146777489325, 1.77913460886195,
1.02105685516234, 1.23943938911009, 1.68832058231962, 0.487649204330305,
0.948202440622289, 1.97702762477577, 0.652991980726557, 1.08960299538868,
0.944726544613009, 2.13882526990733, 2.36252079782457, 2.03635203810681,
1.95923865148876, 2.38321059763039, 2.65796792248053, 0.434742447839765,
0.768420915377185, 2.85352061393806, 2.20249413521686, 1.98840063941439,
2.16277410697969, 2.3647621493964, 2.29856670005149, 3.28781342282218,
1.07886308273954, 1.78901236776204, 1.82472816773094, 0.843361400920166,
2.73914952641111, 0.90430012035187, 1.07291933807019, 2.19284959238498,
2.41556472897301, 0.717614659393543, 0.613327773739556, 1.56874270603156,
0.344303023545618, 2.32393633654675, 2.68780897364277, 1.05551104467561,
1.31597384250029, 1.60947241308156, 2.92937391707375, 3.06849111632904,
0.970580637810116, 1.39419600892722, 1.45236851509845, 2.87900340564011,
2.60823879610928, 1.17211719037378, 1.89579353206133, 0.669694919075565,
1.86672200344229, 1.32535094017338, 1.57292399592366, 0.259950256320573,
0.618347325939748, 0.66928741812925, 0.988399086565923, 2.21047752096232,
0.51300584583813, 1.11436946097306, 0.979586251807792, 1.55266385085409,
2.29328488538894, 1.49117155388504, 2.50078669602275, 1.21115246072218,
1.18637455664357, 2.12118465587983, 1.31911526017789, 2.25665740528514,
2.31768166835999, 2.7844881450174, 2.05141390473266, 1.11882234661836,
1.5186905313308, 0.668337165956597))
where 2 at testthat/test_intkrige.R#22: `interval<-`(`*tmp*`, value = c(0.418365491995753, 1.47354134077123,
-1.06524216887233, -0.207108774198838, 2.12231269411597, -0.194778741322678,
0.123174139527358, 0.775962341442271, -1.17988169217384, -1.68028069978435,
0.558758657953779, -1.55599018651476, 0.599204284966236, 0.213652169734108,
-0.990219190712315, 1.01940385890134, 1.39231937492117, 1.53879350541365,
-0.969559496990451, 0.928684363189913, 2.79125298133861, 2.06236715532859,
0.737648542807372, 2.03487400453048, -0.149435584442715, 2.12839980114353,
-1.96192361400655, 0.164772775574486, -1.26339856752628, 1.41315127340279,
-0.666760539964297, -0.294253162806982, 1.93617670621501, -1.83987264225306,
-0.53853050893861, 1.62225800825558, 0.455883679766254, 2.07033320969072,
-0.0746230356589374, -0.239342808015821, 1.72177399262858, 1.89040864719993,
-0.36849674659894, 1.41960481776632, 2.18364334148044, 2.1464082762694,
-0.820028283074765, 0.462807534815575, 0.89921320096277, 1.99441983880998,
-1.27260680221617, 2.08040087496988, -1.67022500372054, -1.07136302154692,
-1.12677222244004, -1.08523953204977, -0.699368730404234, 1.85825681864222,
-2.13229029444346, -0.873227926734017, -1.13617433044915, -0.981353566579604,
1.85079528616295, -0.832101341373186, -1.28952785954492, 1.85556290971558,
-0.873513355859051, -1.75772144575181, -0.251826419452495, -0.865346300283381,
-0.950800333405811, -0.502530689431868, 0.297071761374247, 2.27370683970852,
1.75071299367405, 1.85807814847575, -0.928777758065737, -1.46499583032732,
0.696073376358676, 1.47363871020412, 1.97111336176914, 1.67278837791385,
-1.07998947542987, -0.031943792155881, -0.138695886275996, -0.344913149836555,
-0.412815678895716, -1.20328823094169, -0.853098264294005, 1.9448854532161,
2.24438638749028, -1.00616285828811, -0.319862423729654, -0.848857663336077,
2.1032114195956, 0.113527954701262, 1.52109490176278, 0.170589305957997,
1.92835256050823, 0.478727028422316, -1.28993705243266, -1.05858409360402,
-1.29809612235213, 1.77330431382617, -0.318433131821512, -0.560198061583635,
0.230727320987328, 1.17608636730304, 1.86772644917089, 0.14289922300931,
-0.963226654211337, 2.1457484864832, 1.6773188965352, -0.569522950542306,
-1.42610840902215, 1.20100106845938, -0.275975933248575, 1.73583607047026,
-0.769336564430801, -0.45429513188804, 2.31580020665055, -0.866138637875745,
-0.19356559656163, -0.240645010491524, -0.320295946694836, -1.00226875949909,
0.358523860579493, -0.043163039077112, -0.693008801533372, 0.600973347086244,
-0.268680596204675, -0.22491827047575, -1.75261228307071, 2.045599244617,
2.65989073723334, 2.05226417105605, -0.63403322467521, -0.324527949016861,
-1.58052807324955, 2.0399437217006, -0.476239165182845, -0.799197766599007,
-0.902723936425676, 0.26941685803089, 2.44527875666278, -0.342315824528007,
-1.08485382295043, -1.8106669805691, 1.62650127713326, -0.812734671362408,
-0.712626378892954, -1.56340808458053, -1.20856574514106, -0.241217789775995,
1.41478668349692, -0.201363773218094, -0.797093719827337, 1.36109019947276,
-1.3911598317334, -0.859122305251436, -0.843990961012984, -0.403176110161335,
-0.842217923725191, -0.0152391624771634, -1.09201467348527, -0.887307483517729,
-0.155747726194188, -1.27301464276882, 1.56858458663206, 1.44464348450119,
-1.08111591447283, 0.417750626704318, -0.588270182125645, 1.95789301151627,
0.146073875821828, 1.54825992279651, -0.156782216546632, 1.84975506115988,
0.340860763246437, -0.833909323058571, 1.42318624893781, 0.0353349640913504,
1.11967808254641, -1.95021660283488, 2.55091154228829, 1.00604004420398,
2.18062326657878, -0.981256887272697, 2.36613302037456, 0.634101962519774,
-0.569149363787301, 1.78418817244521, 2.33728822886715, -1.14566694871249,
-1.39574953799485, -0.561361144483918, -0.0676018105564106, 0.294650775251373,
-1.02796616310227, -0.200132832241444, 1.84221670154721, 0.111601099077165,
1.82849073871616, 1.49100457770297, -0.552875695344789, 2.397329683179,
-0.422954463556638, -0.513320241918272, -0.489117009770523, -3.10483321327279,
-0.93869891134315, -0.169621858942969, 2.20856502731236, 1.71736521833229,
0.0476002928597049, 1.66354074792333, -3.2049318817851, -0.318952150821689,
0.00791908261373567, 2.06585864725562, 1.6703632735936, 1.70360104414078,
1.05151889691628, -0.292230826853229, -0.632760946560897, 1.77108088303816,
-0.970459661640589, -0.135834800059984, -0.199552434940805, -0.291647581928398,
1.81789151629393, 1.45431837375601, 1.28989315592564, 2.40066581265594,
1.89073173832898, -0.99450543633626, -1.13528565149136, 0.125955122721242,
1.98845333350714, -0.200186230640428, -0.758980168390171, -0.962781995739086,
2.10004248937801, -0.439904002492923, 0.0258896717768273, 1.81789765099771,
-0.834573009847336, -0.60426492119313, -1.11904311365489, -0.106461866682613,
-0.0990052217011472, -0.778668083869336, -0.316700330811324,
-0.0957605641538651, 1.66675975827078, 1.99230422825102, 0.370227108481129,
0.168296270548329, -2.23377776086113, 2.47800716354805, -0.39532880236775,
2.26538944958366, -0.762547759975723, 2.0415449350315, -1.70824229401499,
-0.719326807147628, 2.41873636953992, -1.12474887741326, 0.560216729632828,
0.171846406915076, -1.06455744374835, -1.92649367358052, -1.70896025975027,
-0.201272198248735, -0.692229578551859, 1.80401423095775, 0.397395944996051,
-0.510491637865902, -1.19296109102781, -0.316050849904038, -0.252630741708998,
-0.458043576155506, -0.014348752174805, -0.194962759355612, -0.900083045265293,
-0.317086064236675, -0.595281536407783, -1.19379317868191, -0.630935935222634,
-0.285264602899042, -1.14135650493805, -0.309735052372978, -0.200946862994321,
-0.818519151413985, -0.74193008472919, 1.52250710993218, -1.53730619742098,
-3.07075004768663, -1.38627748974725, -0.70684730152841, -0.629579995290828,
-0.64807101238427, -0.707924671223219, 1.87317087171668, -0.440689269673079,
2.25442434271074, -1.39320055553671, -0.231402348150066, 2.03975996254704,
-0.492701486984255, -2.79670869061563, 1.88119577539795, 2.06200968347023,
0.885102300565323, -0.342961253028228, -1.3099562451326, 0.483103659709534,
-0.83706025507423, -0.78470576467156, 2.08350554730084, -0.0608998342139511,
-0.552813602568198, -0.465214893159536, -0.145369132728664, -0.31527140992887,
1.93012863820492, -1.08167769285135, -0.0984633361825953, 1.40076052687354,
-0.732467802326366, 1.29490718105582, -1.13992948808714, -0.483775145698328,
2.40728192254214, -0.557259812902646, -0.0986565208952691, -0.270424932748756,
-0.416888498204461, -0.753215110447633, -0.0277990638872017,
-0.464200357572403, -0.594099577706323, 1.61045369371922, -0.964069467567553,
-0.115108835629506, -0.292802718087924, 0.986234268316154, 1.22384004169086,
0.925061840156825, 1.54261048224707, 1.93718746144434, 1.95787237192517,
-2.29806191632088, -1.03587988642838, 1.84695387375045, 1.84624069019659,
1.64347123311376, 1.09418009087711, 1.21140925363152, 1.65433260660447,
2.84111537711711, -0.559833683147634, 0.781669250930161, 0.347370043205719,
-0.235894983194098, 2.36587185268465, -0.535313979164688, -1.97913566266353,
1.89882280450856, 1.9494545577035, -0.948933073024751, -0.649007361003127,
-0.0337903282545085, -1.72141017081753, 1.79585344554774, 2.26843490007805,
-0.582415422538267, -0.781600571706128, 0.512744113480654, 2.31999915664024,
2.6648875360456, -0.11974750677845, -0.218899551849425, -0.0695971696394982,
2.41927409997686, 2.22125137810234, -0.328357485990048, 1.52848858234289,
-1.96446898611024, -1.59145001891581, -0.187535889639039, 0.157199908583108,
-1.66828766789064, -0.943194747881387, -1.39410068298805, -0.605220297101843,
1.65307409919729, -0.851480559283787, -1.02236394937324, -0.845360634710315,
0.111186113202561, 1.79416239320865, 0.289836504928517, 1.98223992001175,
-0.544260537134924, -0.397371862789191, 1.64994330002405, -0.357233296749463,
1.75681028270571, 1.86024186715292, 2.40624721602136, 1.60753623451818,
-0.264237312400632, 0.371385571133694, -1.60003703989893, 1.38671462278073,
2.1177929917693, 0.863706184430119, 1.00962617993582, 3.16772987150097,
1.37536599170859, 1.47110786422734, 2.23350878943605, 1.1722873525231,
0.471633324879371, 2.08611443167994, 0.268770896127598, 1.6768505777751,
2.49919305904685, 1.12406294493114, 1.95618998779844, 2.001485917774,
1.94633094163513, 0.978701142295188, 1.82575808907846, 3.30749248707347,
2.670962705118, 1.82323188570934, 2.45666879960537, 1.12733634361778,
2.5225688481315, 0.303424072469255, 1.69793939588374, 0.85127059251302,
1.82498114233518, 0.813308586320079, 1.3233932884498, 3.0282589247402,
0.338740609696066, 1.75422178254152, 2.62120737459009, 1.80303408436185,
2.61557871979231, 1.41961732869874, 1.06633555945076, 2.17048699551976,
3.25299606897465, 1.14770795677851, 2.48181572064082, 2.58991052635453,
2.52729633295582, 1.19878929420149, 2.52013832381491, 2.0766954307907,
2.42327659474327, 0.539056141314171, 2.5026259555724, 0.701080893661786,
0.538292258765673, 0.730008889479201, 0.560222414725861, 0.969343548126293,
2.4017435948683, 0.045905090038999, 0.622319420345187, 0.48954369002679,
0.719288495553191, 2.48969399230556, 0.878528608076333, 0.513322178808632,
2.30762893167647, 1.25292521451759, 0.57415379359688, 1.02711532680236,
0.756965875198513, 0.788878919158999, 1.08118529427865, 1.55789080634381,
2.60972700729949, 2.03703988720553, 2.25851465364664, 0.815297708378861,
0.209505400454722, 1.89814659905884, 2.11280079180466, 2.41793039025514,
2.13229604362738, 0.830697909492198, 1.0458986251341, 1.21624499825621,
1.20333703176222, 0.941989554589158, 0.429764439663651, 0.719247624343834,
2.26164607396346, 2.66585368239455, 1.18928669111307, 1.23224503148745,
0.588049419395028, 2.45079035132267, 1.18183090497788, 2.17650424399,
1.75065809752429, 2.46558771801654, 1.59559954767978, 0.377501880288854,
1.18549152380943, 1.3190330992778, 2.24582987776818, 1.15065413469479,
1.09350606005814, 1.41076735119833, 1.59932233739064, 2.23732209930335,
1.57323960967701, 0.511443644528819, 2.65463455968009, 2.02625257342311,
1.05290589162184, 0.631515603976944, 1.70931652423155, 0.96453589291106,
2.13540900620897, 1.10461819457294, 0.946788550264758, 2.79632211247022,
0.832378526604231, 1.1633921782598, 1.37543571681952, 1.18916202023181,
0.697262541017285, 2.25124824419736, 1.19551294081461, 0.687503137786451,
1.61488186290103, 1.29087591849656, 1.00291064359393, 0.310445919722159,
2.82462629592989, 3.0593813874726, 2.31020833237535, 0.96175944777268,
0.699500632617707, 0.304208806634935, 2.42079700142923, 0.825224482925746,
1.04913974110787, 0.86810260190156, 1.40031716978453, 2.91504510197953,
1.02654102360536, 0.830450930310704, 0.424324485170451, 2.43114196100863,
0.528100385485814, 2.18739579425813, 0.622968209215118, 0.588154669715169,
1.4733571444006, 1.81083506590571, 1.13938445792117, 1.15121136340154,
1.80808509157217, 0.501606485563358, 1.07081712277959, 0.436501816529925,
1.82915220591701, 0.603646378181061, 1.09779059474415, 1.36385813837389,
0.736699246077918, 1.27992149262261, 1.5300270867168, 3.03209814041158,
1.8231331188053, 1.0265864871665, 3.42644836771464, 0.642917396605656,
2.38942342002966, 1.80313700920048, 2.43151997410109, 1.4970804879496,
2.18169934257854, 1.64824975862163, 0.990114681845838, 1.73443847854,
1.36184741051441, 1.43867721049933, 0.53589778264585, 3.24899084189408,
1.28910632327191, 2.62010975137708, 0.716545652181128, 2.85077716350376,
1.96127173511554, 0.642978333024334, 2.27030115328334, 2.74037532196631,
0.601462987711984, 0.356689046703278, 1.12618549297071, 1.15180724836055,
1.28946654067007, 0.573170565083053, 0.870804475454833, 2.2244186238024,
1.45324283767525, 2.11397982678782, 1.86652894998056, 1.16660575077499,
2.94738832504411, 1.21258615968114, 1.03580489399709, 0.783836022867922,
-0.0153954958051567, 0.814770764574372, 1.6968462993409, 2.62065848427132,
2.15406755091906, 1.32305624267071, 2.01333980563128, -0.0673750082895199,
0.90104214310933, 1.2889763774775, 2.8268254210741, 1.96539643982094,
2.19332457256186, 2.25809205303973, 1.13113321895444, 0.887406589741054,
2.13698634987261, 1.05586595294042, 1.16580954294559, 1.04327552093333,
0.831108310562077, 2.12816255383745, 2.11539992769514, 2.10963365047833,
2.76167684031925, 2.37871629631932, 0.985760370208604, 0.239825810051924,
1.52372201808274, 2.31601320131684, 1.502543152924, 0.682366163546633,
1.82992189580218, 2.5530652523951, 0.992263410199755, 1.59779415193819,
2.31511280841597, 0.682342809402338, 0.634759065593926, 0.685930819882531,
1.40075724226517, 1.09024020733745, 0.594846921476172, 1.12194859865682,
1.15606759245717, 2.02822135577952, 2.3313347089676, 1.60130899209096,
1.74036132858252, -0.0635724295791441, 2.94315516535086, 1.08424139663346,
2.67747252942974, 0.984189602409169, 2.4915047548276, 0.61894661203433,
0.747052953621296, 2.83161490985122, 1.65535717693601, 2.08522483064736,
1.55100439516724, 0.764460051015793, 1.46708015392338, 0.850151967532255,
1.09793299807262, 1.14113561947946, 2.29751302054737, 1.34797594546622,
0.865613015555012, 1.21696526078399, 1.02254459764346, 1.2700297288493,
0.779541777163049, 1.32813148495833, 1.01324449648633, 0.952190223278335,
1.82806576791411, 0.75147375043188, 0.268573653437645, 1.2842468275259,
1.14440994080356, 0.524673098279538, 1.21866001162954, 1.17504057512501,
1.10289895918835, 0.854889699448369, 2.02564538639023, 0.573979411108547,
0.265068646442383, 0.415465508931337, 0.902681693280644, 1.08814371836109,
1.1793797618874, 1.12329260082692, 2.17304280888567, 0.681789335130774,
2.74497977448441, 0.313710315521848, 1.26243355100742, 2.43536679653822,
1.02952706723718, -0.191571898552905, 2.25713007645719, 2.32110383809599,
1.92039465510038, 1.33269248813733, 0.909664200081069, 1.69952184916625,
0.480330370178646, 1.19680345746866, 2.37996850669148, 1.72035623164475,
1.05516321243857, 0.878072629654312, 1.29047065336169, 1.04482800236919,
2.35916260580079, 0.559280931716504, 1.09503000789458, 3.08481163599712,
0.558147566967517, 1.73125664137665, 0.815621155800615, 0.96123222391557,
2.82383080085363, 1.4169074276135, 1.11146777489325, 1.77913460886195,
1.02105685516234, 1.23943938911009, 1.68832058231962, 0.487649204330305,
0.948202440622289, 1.97702762477577, 0.652991980726557, 1.08960299538868,
0.944726544613009, 2.13882526990733, 2.36252079782457, 2.03635203810681,
1.95923865148876, 2.38321059763039, 2.65796792248053, 0.434742447839765,
0.768420915377185, 2.85352061393806, 2.20249413521686, 1.98840063941439,
2.16277410697969, 2.3647621493964, 2.29856670005149, 3.28781342282218,
1.07886308273954, 1.78901236776204, 1.82472816773094, 0.843361400920166,
2.73914952641111, 0.90430012035187, 1.07291933807019, 2.19284959238498,
2.41556472897301, 0.717614659393543, 0.613327773739556, 1.56874270603156,
0.344303023545618, 2.32393633654675, 2.68780897364277, 1.05551104467561,
1.31597384250029, 1.60947241308156, 2.92937391707375, 3.06849111632904,
0.970580637810116, 1.39419600892722, 1.45236851509845, 2.87900340564011,
2.60823879610928, 1.17211719037378, 1.89579353206133, 0.669694919075565,
1.86672200344229, 1.32535094017338, 1.57292399592366, 0.259950256320573,
0.618347325939748, 0.66928741812925, 0.988399086565923, 2.21047752096232,
0.51300584583813, 1.11436946097306, 0.979586251807792, 1.55266385085409,
2.29328488538894, 1.49117155388504, 2.50078669602275, 1.21115246072218,
1.18637455664357, 2.12118465587983, 1.31911526017789, 2.25665740528514,
2.31768166835999, 2.7844881450174, 2.05141390473266, 1.11882234661836,
1.5186905313308, 0.668337165956597))
where 3: eval(code, test_env)
where 4: eval(code, test_env)
where 5: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 6: doTryCatch(return(expr), name, parentenv, handler)
where 7: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 8: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 9: doTryCatch(return(expr), name, parentenv, handler)
where 10: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 11: tryCatchList(expr, classes, parentenv, handlers)
where 12: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 13: test_code(desc, code, env = parent.frame())
where 14 at testthat/test_intkrige.R#4: test_that("prediction for sample case is as expected", {
templocs <- data.frame(lat = 41.745, long = -111.81, ELEVATION = 1456)
sp::coordinates(templocs) <- c("long", "lat")
sp::proj4string(templocs) <- "+proj=longlat +ellps=WGS84\n +datum=WGS84 +no_defs +towgs84=0,0,0"
data(utsnow)
utsnow.sp <- utsnow
sp::coordinates(utsnow.sp) <- c("LONGITUDE", "LATITUDE")
sp::proj4string(utsnow.sp) <- sp::proj4string(templocs)
interval(utsnow.sp) <- c("minDL", "maxDL")
interval(utsnow.sp) <- log(interval(utsnow.sp))
temp_formulas <- list(center ~ ELEVATION, radius * (ELEVATION/median(ELEVATION)) ~
1)
varios <- intvariogram(utsnow.sp, formulas = temp_formulas)
varioFit <- fit.intvariogram(varios, models = gstat::vgm(c("Sph",
"Sph", "Gau")))
preds <- intkrige::intkrige(locations = utsnow.sp, newdata = templocs,
models = varioFit, formulas = temp_formulas)
target <- data.frame(lower = -0.0361, upper = 0.9703)
expect_equal(round(interval(preds), 4), as.matrix(target))
})
where 15: eval(code, test_env)
where 16: eval(code, test_env)
where 17: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 18: doTryCatch(return(expr), name, parentenv, handler)
where 19: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 20: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 21: doTryCatch(return(expr), name, parentenv, handler)
where 22: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 23: tryCatchList(expr, classes, parentenv, handlers)
where 24: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 25: test_code(NULL, exprs, env)
where 26: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 27: force(code)
where 28: doWithOneRestart(return(expr), restart)
where 29: withOneRestart(expr, restarts[[1L]])
where 30: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 31: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 32: FUN(X[[i]], ...)
where 33: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 34: force(code)
where 35: doWithOneRestart(return(expr), restart)
where 36: withOneRestart(expr, restarts[[1L]])
where 37: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 38: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 39: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 40: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 41: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_check("intkrige")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
Method Definition:
function (x, value)
{
if (is.null(value) | all(is.na(value))) {
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
x <- as(x, "SpatialPointsDataFrame")
return(x)
}
else if (class(value) == "character") {
if (length(value) != 2) {
stop("exactly two variable names are needed\n to define an interval")
}
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
if (class(x@data[, value[1]]) != "numeric" | class(x@data[,
value[2]]) != "numeric") {
stop("non-numeric input detected")
}
x@interval <- matrix(c(x@data[, value[1]], x@data[, value[2]]),
ncol = 2)
x@data[, value[1]] <- NULL
x@data[, value[2]] <- NULL
colnames(x@interval) <- c(value[1], value[2])
}
else if (class(value) == "matrix") {
if (nrow(value) != nrow(coordinates(x@coords)) | ncol(value) !=
ncol(coordinates(x@coords))) {
stop("matrix dimensions must match the slot dimensions")
}
x@interval <- value
}
else {
stop("'value' must be a vector of column names or a matrix")
}
if (any(x@interval[, 1] > x@interval[, 2])) {
stop("detected at least one lower endpoint\n greater than upper endpoint")
}
return(x)
}
<bytecode: 0x56411e5c5a78>
<environment: namespace:intkrige>
Signatures:
x
target "intsp"
defined "intsp"
--- function search by body ---
S4 Method interval<-:intkrige defined in namespace intkrige with signature intsp has this body.
----------- END OF FAILURE REPORT --------------
Fatal error: the condition has length > 1
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘intkriging-workflow.Rmd’ using rmarkdown
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
intkrige
--- call from context ---
`interval<-`(`*tmp*`, value = c(4.33217982783654, 4.21316396874786,
4.05882903821468, 4.31821539206891, 4.06002890215481, 4.28175592864488,
4.14902252693045, 4.28938037700111, 4.45073011525898, 4.10738078638217,
4.12961449162839, 4.21748414895893, 3.90062766363698, 4.1085586088862,
3.91181266265486, 3.99976958889747, 4.07579347503063, 4.15136347073487,
3.81026027178004, 3.96896272262243, 3.97311837055695, 3.90904736445526,
3.97574170211395, 3.83361471340459, 4.12525020260999, 4.13392859719358,
4.0174973397183, 4.36229136782735, 3.99126763186237, 3.85311364458008,
3.97097875187247, 4.09947695586539, 4.07557637100246, 3.95408376477466,
3.86125435545686, 4.26189103072331, 4.00692444444734, 3.98106666796507,
3.86260464466524, 4.35663022288955, 4.38421865210439, 4.31677728494241,
4.13585898976884, 4.45424235671911, 4.19505406138208, 4.32126040948688,
4.50070977181091, 4.15549008981506, 4.49913124472783, 4.31830215701782,
4.1935893564038, 2.42665616386025, 2.74174912309121, 3.92502746561371,
3.88442736290199, 3.71297545773819, 3.95808731144481, 4.02730717591409,
3.81465130752318, 4.12693352404207, 4.23964883672721, 3.81584944943091,
4.17326729813228, 4.187582793306, 3.91643226516045, 4.01815706378651,
3.76780853989852, 3.71211992378198, 4.14174837082472, 3.94819245543766,
3.79708522953851, 3.90297189394419, 3.74485044150587, 4.05862134033248,
4.26374344503814, 3.85702815963416, 3.66901714164898, 4.02761195131206,
4.01716268653702, 4.02044647597441, 3.7696578708199, 4.09278785733552,
2.59153485212745, 3.54338086050882, 3.47571434695011, 4.12192349519398,
3.21304340342202, 3.5521806804922, 3.71680250391935, 3.47338070228631,
1.63155258521308, 4.03680394904386, 2.78368093910275, 3.67815561586318,
3.49386735654529, 2.92859426892918, 4.04329619893411, 3.4863110616254,
3.63908395841057, 4.26698822103253, 4.30892005323653, 4.4926243130918,
4.39905269340602, 4.44071942055401, 4.51938739152626, 4.50106842807874,
4.47045750026273, 4.26968522329686, 4.38650803095586, 4.41515942258358,
4.33608187015765, 3.60822110055523, 4.16570883266853, 3.99720691920075,
4.0107167906813, 3.94616923502509, 3.79405992929561, 3.92441415602965,
4.27451096554972, 4.05714548683387, 4.08719672008373, 4.11079446340366,
3.83823884547571, 4.28827546616719, 4.17182323564793, 3.89425859929745,
4.17636791863717, 4.06813516009082, 3.17727590896819, 3.98833248004467,
3.9324731007872, 4.05330870914499, 3.73972380819812, 3.836968735987,
3.80645891763142, 4.20831909819201, 4.47960676524771, 4.28053239741592,
4.34849664189872, 4.10518604573432, 4.48412255191609, 3.66396605298537,
4.18608296696907, 4.30195516673641, 4.59010587610666, 4.15647737036743,
3.92846975112189, 3.81664477285207, 3.92280470073023, 3.9386554909517,
4.44867073059151, 4.27974950522396, 4.26499089486628, 4.14291007024306,
4.38893208490232, 4.19076294844952, 4.38667190021942, 4.48882891008718,
4.00118190810347, 4.0485404094379, 4.0700459078587, 5.28181863583495,
5.19683710668685, 5.18509087318455, 5.28381687957281, 5.13729208605825,
5.25646025815053, 5.18533965449842, 5.29205824452895, 5.29698566476211,
5.12741849371852, 5.13161117766937, 5.21504933652221, 5.05658284453837,
5.21994059700452, 5.10711006892037, 5.11978518715518, 5.1537405236136,
5.16713400221745, 5.09038457432557, 5.12460299941916, 5.10347932432947,
5.1104836964841, 5.16768481632567, 5.10000430759972, 5.2350761291015,
5.25941551856322, 5.14783764048767, 5.27745438298709, 5.1294472270992,
5.07405909392304, 5.13778076684614, 5.1781197144492, 5.25281241799254,
5.19053450505335, 5.0872579603039, 5.24767163572529, 5.11447307707304,
5.14097598267349, 5.09989078184461, 5.30518814084701, 5.34786766630723,
5.26985388411388, 5.30411843463448, 5.34786426080421, 5.33295355497722,
5.31349083394709, 5.35921292891882, 5.30876295597388, 5.32855812460508,
5.29245350166334, 5.24591201196347, 4.88920392236548, 4.88619484011897,
5.09596772324307, 5.18117157775244, 5.14840087857546, 5.08458559769531,
5.18217219134197, 5.06092336636175, 5.21341676377601, 5.18225291149474,
5.13800588357794, 5.234912499785, 5.29509535874894, 5.0944288168259,
5.16737326975868, 5.00961144951833, 5.04148641634894, 5.21883298259491,
5.12150711855914, 5.12413075654839, 5.14637874615925, 5.18187068483276,
5.18890404043622, 5.27483916801434, 5.09588236978635, 5.08842291593328,
5.25213668337199, 5.18423796228521, 5.16862831223972, 5.06362924415463,
5.16005754177796, 4.93107033194026, 5.07140959874241, 5.11164934687381,
5.20303266828226, 5.03548937078404, 5.10180556909374, 5.10630867159093,
5.00733303041308, 4.89995385231163, 5.12451282858476, 4.9998275248928,
5.11556387392389, 5.06974429991514, 4.9943294179463, 5.17390534736359,
5.0118649410573, 5.15409516491327, 5.27169484034679, 5.38082185133642,
5.37533012644843, 5.33845428761326, 5.37133335702072, 5.38641227297884,
5.37838442156117, 5.31981367001254, 5.33668948656324, 5.37717917001142,
5.32510753822487, 5.40404454310192, 5.09108778906081, 5.30023626797339,
5.21817187527419, 5.21919823804696, 5.21847999164694, 5.16782321615654,
5.1993671650545, 5.22294476439076, 5.20098397712863, 5.27411980762093,
5.25442310894233, 5.18413390310191, 5.27335256483966, 5.30704093874769,
5.20226925985556, 5.11758745701273, 5.28529073635936, 4.71176161970905,
5.24987644538491, 5.14998909619304, 5.27480748085683, 4.97222202793221,
5.20467191718163, 5.23536592096326, 5.2682112771898, 5.3190528173701,
5.12738527610333, 5.25237304226676, 5.11567776255035, 5.26521359719198,
5.13853830263968, 5.1658797209383, 5.26304542449425, 5.37611885450575,
5.14618199471878, 5.06194408779695, 5.02412471387861, 5.02378617316784,
5.04748946497678, 5.35046081416237, 5.23824772748714, 5.19435760792557,
5.12385232955331, 5.2796766061142, 5.15270752566062, 5.22712636869643,
5.2874198613428, 5.139046547993, 5.09046421263196, 5.10202437264807
))
--- call from argument ---
if (class(value) == "character") {
if (length(value) != 2) {
stop("exactly two variable names are needed\n to define an interval")
}
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
if (class(x@data[, value[1]]) != "numeric" | class(x@data[,
value[2]]) != "numeric") {
stop("non-numeric input detected")
}
x@interval <- matrix(c(x@data[, value[1]], x@data[, value[2]]),
ncol = 2)
x@data[, value[1]] <- NULL
x@data[, value[2]] <- NULL
colnames(x@interval) <- c(value[1], value[2])
} else if (class(value) == "matrix") {
if (nrow(value) != nrow(coordinates(x@coords)) | ncol(value) !=
ncol(coordinates(x@coords))) {
stop("matrix dimensions must match the slot dimensions")
}
x@interval <- value
} else {
stop("'value' must be a vector of column names or a matrix")
}
--- R stacktrace ---
where 1: `interval<-`(`*tmp*`, value = c(4.33217982783654, 4.21316396874786,
4.05882903821468, 4.31821539206891, 4.06002890215481, 4.28175592864488,
4.14902252693045, 4.28938037700111, 4.45073011525898, 4.10738078638217,
4.12961449162839, 4.21748414895893, 3.90062766363698, 4.1085586088862,
3.91181266265486, 3.99976958889747, 4.07579347503063, 4.15136347073487,
3.81026027178004, 3.96896272262243, 3.97311837055695, 3.90904736445526,
3.97574170211395, 3.83361471340459, 4.12525020260999, 4.13392859719358,
4.0174973397183, 4.36229136782735, 3.99126763186237, 3.85311364458008,
3.97097875187247, 4.09947695586539, 4.07557637100246, 3.95408376477466,
3.86125435545686, 4.26189103072331, 4.00692444444734, 3.98106666796507,
3.86260464466524, 4.35663022288955, 4.38421865210439, 4.31677728494241,
4.13585898976884, 4.45424235671911, 4.19505406138208, 4.32126040948688,
4.50070977181091, 4.15549008981506, 4.49913124472783, 4.31830215701782,
4.1935893564038, 2.42665616386025, 2.74174912309121, 3.92502746561371,
3.88442736290199, 3.71297545773819, 3.95808731144481, 4.02730717591409,
3.81465130752318, 4.12693352404207, 4.23964883672721, 3.81584944943091,
4.17326729813228, 4.187582793306, 3.91643226516045, 4.01815706378651,
3.76780853989852, 3.71211992378198, 4.14174837082472, 3.94819245543766,
3.79708522953851, 3.90297189394419, 3.74485044150587, 4.05862134033248,
4.26374344503814, 3.85702815963416, 3.66901714164898, 4.02761195131206,
4.01716268653702, 4.02044647597441, 3.7696578708199, 4.09278785733552,
2.59153485212745, 3.54338086050882, 3.47571434695011, 4.12192349519398,
3.21304340342202, 3.5521806804922, 3.71680250391935, 3.47338070228631,
1.63155258521308, 4.03680394904386, 2.78368093910275, 3.67815561586318,
3.49386735654529, 2.92859426892918, 4.04329619893411, 3.4863110616254,
3.63908395841057, 4.26698822103253, 4.30892005323653, 4.4926243130918,
4.39905269340602, 4.44071942055401, 4.51938739152626, 4.50106842807874,
4.47045750026273, 4.26968522329686, 4.38650803095586, 4.41515942258358,
4.33608187015765, 3.60822110055523, 4.16570883266853, 3.99720691920075,
4.0107167906813, 3.94616923502509, 3.79405992929561, 3.92441415602965,
4.27451096554972, 4.05714548683387, 4.08719672008373, 4.11079446340366,
3.83823884547571, 4.28827546616719, 4.17182323564793, 3.89425859929745,
4.17636791863717, 4.06813516009082, 3.17727590896819, 3.98833248004467,
3.9324731007872, 4.05330870914499, 3.73972380819812, 3.836968735987,
3.80645891763142, 4.20831909819201, 4.47960676524771, 4.28053239741592,
4.34849664189872, 4.10518604573432, 4.48412255191609, 3.66396605298537,
4.18608296696907, 4.30195516673641, 4.59010587610666, 4.15647737036743,
3.92846975112189, 3.81664477285207, 3.92280470073023, 3.9386554909517,
4.44867073059151, 4.27974950522396, 4.26499089486628, 4.14291007024306,
4.38893208490232, 4.19076294844952, 4.38667190021942, 4.48882891008718,
4.00118190810347, 4.0485404094379, 4.0700459078587, 5.28181863583495,
5.19683710668685, 5.18509087318455, 5.28381687957281, 5.13729208605825,
5.25646025815053, 5.18533965449842, 5.29205824452895, 5.29698566476211,
5.12741849371852, 5.13161117766937, 5.21504933652221, 5.05658284453837,
5.21994059700452, 5.10711006892037, 5.11978518715518, 5.1537405236136,
5.16713400221745, 5.09038457432557, 5.12460299941916, 5.10347932432947,
5.1104836964841, 5.16768481632567, 5.10000430759972, 5.2350761291015,
5.25941551856322, 5.14783764048767, 5.27745438298709, 5.1294472270992,
5.07405909392304, 5.13778076684614, 5.1781197144492, 5.25281241799254,
5.19053450505335, 5.0872579603039, 5.24767163572529, 5.11447307707304,
5.14097598267349, 5.09989078184461, 5.30518814084701, 5.34786766630723,
5.26985388411388, 5.30411843463448, 5.34786426080421, 5.33295355497722,
5.31349083394709, 5.35921292891882, 5.30876295597388, 5.32855812460508,
5.29245350166334, 5.24591201196347, 4.88920392236548, 4.88619484011897,
5.09596772324307, 5.18117157775244, 5.14840087857546, 5.08458559769531,
5.18217219134197, 5.06092336636175, 5.21341676377601, 5.18225291149474,
5.13800588357794, 5.234912499785, 5.29509535874894, 5.0944288168259,
5.16737326975868, 5.00961144951833, 5.04148641634894, 5.21883298259491,
5.12150711855914, 5.12413075654839, 5.14637874615925, 5.18187068483276,
5.18890404043622, 5.27483916801434, 5.09588236978635, 5.08842291593328,
5.25213668337199, 5.18423796228521, 5.16862831223972, 5.06362924415463,
5.16005754177796, 4.93107033194026, 5.07140959874241, 5.11164934687381,
5.20303266828226, 5.03548937078404, 5.10180556909374, 5.10630867159093,
5.00733303041308, 4.89995385231163, 5.12451282858476, 4.9998275248928,
5.11556387392389, 5.06974429991514, 4.9943294179463, 5.17390534736359,
5.0118649410573, 5.15409516491327, 5.27169484034679, 5.38082185133642,
5.37533012644843, 5.33845428761326, 5.37133335702072, 5.38641227297884,
5.37838442156117, 5.31981367001254, 5.33668948656324, 5.37717917001142,
5.32510753822487, 5.40404454310192, 5.09108778906081, 5.30023626797339,
5.21817187527419, 5.21919823804696, 5.21847999164694, 5.16782321615654,
5.1993671650545, 5.22294476439076, 5.20098397712863, 5.27411980762093,
5.25442310894233, 5.18413390310191, 5.27335256483966, 5.30704093874769,
5.20226925985556, 5.11758745701273, 5.28529073635936, 4.71176161970905,
5.24987644538491, 5.14998909619304, 5.27480748085683, 4.97222202793221,
5.20467191718163, 5.23536592096326, 5.2682112771898, 5.3190528173701,
5.12738527610333, 5.25237304226676, 5.11567776255035, 5.26521359719198,
5.13853830263968, 5.1658797209383, 5.26304542449425, 5.37611885450575,
5.14618199471878, 5.06194408779695, 5.02412471387861, 5.02378617316784,
5.04748946497678, 5.35046081416237, 5.23824772748714, 5.19435760792557,
5.12385232955331, 5.2796766061142, 5.15270752566062, 5.22712636869643,
5.2874198613428, 5.139046547993, 5.09046421263196, 5.10202437264807
))
where 2: `interval<-`(`*tmp*`, value = c(4.33217982783654, 4.21316396874786,
4.05882903821468, 4.31821539206891, 4.06002890215481, 4.28175592864488,
4.14902252693045, 4.28938037700111, 4.45073011525898, 4.10738078638217,
4.12961449162839, 4.21748414895893, 3.90062766363698, 4.1085586088862,
3.91181266265486, 3.99976958889747, 4.07579347503063, 4.15136347073487,
3.81026027178004, 3.96896272262243, 3.97311837055695, 3.90904736445526,
3.97574170211395, 3.83361471340459, 4.12525020260999, 4.13392859719358,
4.0174973397183, 4.36229136782735, 3.99126763186237, 3.85311364458008,
3.97097875187247, 4.09947695586539, 4.07557637100246, 3.95408376477466,
3.86125435545686, 4.26189103072331, 4.00692444444734, 3.98106666796507,
3.86260464466524, 4.35663022288955, 4.38421865210439, 4.31677728494241,
4.13585898976884, 4.45424235671911, 4.19505406138208, 4.32126040948688,
4.50070977181091, 4.15549008981506, 4.49913124472783, 4.31830215701782,
4.1935893564038, 2.42665616386025, 2.74174912309121, 3.92502746561371,
3.88442736290199, 3.71297545773819, 3.95808731144481, 4.02730717591409,
3.81465130752318, 4.12693352404207, 4.23964883672721, 3.81584944943091,
4.17326729813228, 4.187582793306, 3.91643226516045, 4.01815706378651,
3.76780853989852, 3.71211992378198, 4.14174837082472, 3.94819245543766,
3.79708522953851, 3.90297189394419, 3.74485044150587, 4.05862134033248,
4.26374344503814, 3.85702815963416, 3.66901714164898, 4.02761195131206,
4.01716268653702, 4.02044647597441, 3.7696578708199, 4.09278785733552,
2.59153485212745, 3.54338086050882, 3.47571434695011, 4.12192349519398,
3.21304340342202, 3.5521806804922, 3.71680250391935, 3.47338070228631,
1.63155258521308, 4.03680394904386, 2.78368093910275, 3.67815561586318,
3.49386735654529, 2.92859426892918, 4.04329619893411, 3.4863110616254,
3.63908395841057, 4.26698822103253, 4.30892005323653, 4.4926243130918,
4.39905269340602, 4.44071942055401, 4.51938739152626, 4.50106842807874,
4.47045750026273, 4.26968522329686, 4.38650803095586, 4.41515942258358,
4.33608187015765, 3.60822110055523, 4.16570883266853, 3.99720691920075,
4.0107167906813, 3.94616923502509, 3.79405992929561, 3.92441415602965,
4.27451096554972, 4.05714548683387, 4.08719672008373, 4.11079446340366,
3.83823884547571, 4.28827546616719, 4.17182323564793, 3.89425859929745,
4.17636791863717, 4.06813516009082, 3.17727590896819, 3.98833248004467,
3.9324731007872, 4.05330870914499, 3.73972380819812, 3.836968735987,
3.80645891763142, 4.20831909819201, 4.47960676524771, 4.28053239741592,
4.34849664189872, 4.10518604573432, 4.48412255191609, 3.66396605298537,
4.18608296696907, 4.30195516673641, 4.59010587610666, 4.15647737036743,
3.92846975112189, 3.81664477285207, 3.92280470073023, 3.9386554909517,
4.44867073059151, 4.27974950522396, 4.26499089486628, 4.14291007024306,
4.38893208490232, 4.19076294844952, 4.38667190021942, 4.48882891008718,
4.00118190810347, 4.0485404094379, 4.0700459078587, 5.28181863583495,
5.19683710668685, 5.18509087318455, 5.28381687957281, 5.13729208605825,
5.25646025815053, 5.18533965449842, 5.29205824452895, 5.29698566476211,
5.12741849371852, 5.13161117766937, 5.21504933652221, 5.05658284453837,
5.21994059700452, 5.10711006892037, 5.11978518715518, 5.1537405236136,
5.16713400221745, 5.09038457432557, 5.12460299941916, 5.10347932432947,
5.1104836964841, 5.16768481632567, 5.10000430759972, 5.2350761291015,
5.25941551856322, 5.14783764048767, 5.27745438298709, 5.1294472270992,
5.07405909392304, 5.13778076684614, 5.1781197144492, 5.25281241799254,
5.19053450505335, 5.0872579603039, 5.24767163572529, 5.11447307707304,
5.14097598267349, 5.09989078184461, 5.30518814084701, 5.34786766630723,
5.26985388411388, 5.30411843463448, 5.34786426080421, 5.33295355497722,
5.31349083394709, 5.35921292891882, 5.30876295597388, 5.32855812460508,
5.29245350166334, 5.24591201196347, 4.88920392236548, 4.88619484011897,
5.09596772324307, 5.18117157775244, 5.14840087857546, 5.08458559769531,
5.18217219134197, 5.06092336636175, 5.21341676377601, 5.18225291149474,
5.13800588357794, 5.234912499785, 5.29509535874894, 5.0944288168259,
5.16737326975868, 5.00961144951833, 5.04148641634894, 5.21883298259491,
5.12150711855914, 5.12413075654839, 5.14637874615925, 5.18187068483276,
5.18890404043622, 5.27483916801434, 5.09588236978635, 5.08842291593328,
5.25213668337199, 5.18423796228521, 5.16862831223972, 5.06362924415463,
5.16005754177796, 4.93107033194026, 5.07140959874241, 5.11164934687381,
5.20303266828226, 5.03548937078404, 5.10180556909374, 5.10630867159093,
5.00733303041308, 4.89995385231163, 5.12451282858476, 4.9998275248928,
5.11556387392389, 5.06974429991514, 4.9943294179463, 5.17390534736359,
5.0118649410573, 5.15409516491327, 5.27169484034679, 5.38082185133642,
5.37533012644843, 5.33845428761326, 5.37133335702072, 5.38641227297884,
5.37838442156117, 5.31981367001254, 5.33668948656324, 5.37717917001142,
5.32510753822487, 5.40404454310192, 5.09108778906081, 5.30023626797339,
5.21817187527419, 5.21919823804696, 5.21847999164694, 5.16782321615654,
5.1993671650545, 5.22294476439076, 5.20098397712863, 5.27411980762093,
5.25442310894233, 5.18413390310191, 5.27335256483966, 5.30704093874769,
5.20226925985556, 5.11758745701273, 5.28529073635936, 4.71176161970905,
5.24987644538491, 5.14998909619304, 5.27480748085683, 4.97222202793221,
5.20467191718163, 5.23536592096326, 5.2682112771898, 5.3190528173701,
5.12738527610333, 5.25237304226676, 5.11567776255035, 5.26521359719198,
5.13853830263968, 5.1658797209383, 5.26304542449425, 5.37611885450575,
5.14618199471878, 5.06194408779695, 5.02412471387861, 5.02378617316784,
5.04748946497678, 5.35046081416237, 5.23824772748714, 5.19435760792557,
5.12385232955331, 5.2796766061142, 5.15270752566062, 5.22712636869643,
5.2874198613428, 5.139046547993, 5.09046421263196, 5.10202437264807
))
where 3: eval(expr, envir, enclos)
where 4: eval(expr, envir, enclos)
where 5: withVisible(eval(expr, envir, enclos))
where 6: withCallingHandlers(withVisible(eval(expr, envir, enclos)), warning = wHandler,
error = eHandler, message = mHandler)
where 7: handle(ev <- withCallingHandlers(withVisible(eval(expr, envir,
enclos)), warning = wHandler, error = eHandler, message = mHandler))
where 8: timing_fn(handle(ev <- withCallingHandlers(withVisible(eval(expr,
envir, enclos)), warning = wHandler, error = eHandler, message = mHandler)))
where 9: evaluate_call(expr, parsed$src[[i]], envir = envir, enclos = enclos,
debug = debug, last = i == length(out), use_try = stop_on_error !=
2L, keep_warning = keep_warning, keep_message = keep_message,
output_handler = output_handler, include_timing = include_timing)
where 10: evaluate::evaluate(...)
where 11: evaluate(code, envir = env, new_device = FALSE, keep_warning = !isFALSE(options$warning),
keep_message = !isFALSE(options$message), stop_on_error = if (options$error &&
options$include) 0L else 2L, output_handler = knit_handlers(options$render,
options))
where 12: in_dir(input_dir(), evaluate(code, envir = env, new_device = FALSE,
keep_warning = !isFALSE(options$warning), keep_message = !isFALSE(options$message),
stop_on_error = if (options$error && options$include) 0L else 2L,
output_handler = knit_handlers(options$render, options)))
where 13: block_exec(params)
where 14: call_block(x)
where 15: process_group.block(group)
where 16: process_group(group)
where 17: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),
error = function(e) {
setwd(wd)
cat(res, sep = "\n", file = output %n% "")
message("Quitting from lines ", paste(current_lines(i),
collapse = "-"), " (", knit_concord$get("infile"),
") ")
})
where 18: process_file(text, output)
where 19: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet,
encoding = encoding)
where 20: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(),
...)
where 21: vweave_rmarkdown(...)
where 22: engine$weave(file, quiet = quiet, encoding = enc)
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch({
engine$weave(file, quiet = quiet, encoding = enc)
setwd(startdir)
output <- find_vignette_product(name, by = "weave", engine = engine)
if (!have.makefile && vignette_is_tex(output)) {
texi2pdf(file = output, clean = FALSE, quiet = quiet)
output <- find_vignette_product(name, by = "texi2pdf",
engine = engine)
}
outputs <- c(outputs, output)
}, error = function(e) {
thisOK <<- FALSE
fails <<- c(fails, file)
message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s",
file, conditionMessage(e)))
})
where 27: tools:::buildVignettes(dir = "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/intkrige.Rcheck/vign_test/intkrige",
ser_elibs = "/home/hornik/tmp/scratch/RtmpeL1u0a/file1e752c0485dc.rds")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
Method Definition:
function (x, value)
{
if (is.null(value) | all(is.na(value))) {
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
x <- as(x, "SpatialPointsDataFrame")
return(x)
}
else if (class(value) == "character") {
if (length(value) != 2) {
stop("exactly two variable names are needed\n to define an interval")
}
if (nrow(x@interval) > 0) {
x@data <- cbind(x@data, as.data.frame(x@interval))
}
if (class(x@data[, value[1]]) != "numeric" | class(x@data[,
value[2]]) != "numeric") {
stop("non-numeric input detected")
}
x@interval <- matrix(c(x@data[, value[1]], x@data[, value[2]]),
ncol = 2)
x@data[, value[1]] <- NULL
x@data[, value[2]] <- NULL
colnames(x@interval) <- c(value[1], value[2])
}
else if (class(value) == "matrix") {
if (nrow(value) != nrow(coordinates(x@coords)) | ncol(value) !=
ncol(coordinates(x@coords))) {
stop("matrix dimensions must match the slot dimensions")
}
x@interval <- value
}
else {
stop("'value' must be a vector of column names or a matrix")
}
if (any(x@interval[, 1] > x@interval[, 2])) {
stop("detected at least one lower endpoint\n greater than upper endpoint")
}
return(x)
}
<bytecode: 0x563b98264168>
<environment: namespace:intkrige>
Signatures:
x
target "intsp"
defined "intsp"
--- function search by body ---
S4 Method interval<-:intkrige defined in namespace intkrige with signature intsp has this body.
----------- END OF FAILURE REPORT --------------
Fatal error: the condition has length > 1
Flavor: r-devel-linux-x86_64-debian-gcc