CollessLike: Distribution and Percentile of Sackin, Cophenetic and Colless-Like Balance Indices of Phylogenetic Trees

Computation of Colless-Like, Sackin and cophenetic balance indices of a phylogenetic tree and study of the distribution of these balance indices under the alpha-gamma model. For more details see A. Mir, F. Rossello, L. Rotger (2013) <doi:10.1016/j.mbs.2012.10.005> and (2018) <doi:10.1371/journal.pone.0203401>, M. J. Sackin (1972) <doi:10.1093/sysbio/21.2.225>, D. H. Colless (1982) <doi:10.2307/2413420>.

Version: 2.0
Depends: R (≥ 3.3.0)
Imports: ape, igraph
Published: 2019-10-12
Author: Arnau Mir, Francesc Rossello, Lucia Rotger
Maintainer: Lucia Rotger <lucia.rotger at uib.es>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/LuciaRotger/CollessLike
NeedsCompilation: no
Materials: README
CRAN checks: CollessLike results

Downloads:

Reference manual: CollessLike.pdf
Package source: CollessLike_2.0.tar.gz
Windows binaries: r-devel: CollessLike_2.0.zip, r-devel-gcc8: CollessLike_2.0.zip, r-release: CollessLike_2.0.zip, r-oldrel: CollessLike_2.0.zip
OS X binaries: r-release: CollessLike_2.0.tgz, r-oldrel: CollessLike_2.0.tgz
Old sources: CollessLike archive

Reverse dependencies:

Reverse suggests: TotalCopheneticIndex

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