A spatio-temporal stochastic model to assess resistance deployment strategies against plant pathogens. The model is based on stochastic geometry for describing the landscape and the resistant hosts, a dispersal kernel for the dissemination of the pathogen, and a SEIR (Susceptible-Exposed-Infectious-Removed) architecture to simulate plant response to disease. Loup Rimbaud, Julien Papaïx, Jean-François Rey, Luke G Barrett, Peter H Thrall (2018) <doi:10.1371/journal.pcbi.1006067>.
| Version: | 0.0.8 |
| Depends: | methods, utils, grDevices (≥ 3.0.0), graphics (≥ 3.0.0), R (≥ 3.3.0), Rcpp (≥ 0.9.0), rgdal (≥ 1.2-16) |
| Imports: | sp (≥ 1.0-17), stats (≥ 3.0.2), Matrix, MASS, rgeos, maptools, fields, splancs, sf |
| LinkingTo: | Rcpp |
| Published: | 2019-10-04 |
| Author: | Loup Rimbaud [aut], Julien Papaix [aut], Jean-Francois Rey [cre] |
| Maintainer: | Jean-Francois Rey <jean-francois.rey at inra.fr> |
| BugReports: | https://gitlab.paca.inra.fr/CSIRO-INRA/landsepi/issues |
| License: | GPL-2 | GPL-3 | file LICENSE [expanded from: GPL (≥ 2) | file LICENSE] |
| URL: | https://gitlab.paca.inra.fr/CSIRO-INRA/landsepi |
| NeedsCompilation: | yes |
| SystemRequirements: | C++11, gsl, gdal >= 1.11.0 |
| Citation: | landsepi citation info |
| CRAN checks: | landsepi results |
| Reference manual: | landsepi.pdf |
| Package source: | landsepi_0.0.8.tar.gz |
| Windows binaries: | r-devel: landsepi_0.0.8.zip, r-devel-gcc8: landsepi_0.0.8.zip, r-release: landsepi_0.0.8.zip, r-oldrel: landsepi_0.0.8.zip |
| OS X binaries: | r-release: landsepi_0.0.8.tgz, r-oldrel: landsepi_0.0.8.tgz |
| Old sources: | landsepi archive |
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