An implementation of a phylogenetic comparative method. It can fit univariate among-species Ornstein-Uhlenbeck models of phenotypic trait evolution, where the trait evolves towards a primary optimum. The optimum can be modelled as a single parameter, as multiple discrete regimes on the phylogenetic tree, and/or with continuous covariates. See also Hansen (1997) doi:10.2307/2411186, Butler & King (2004) doi:10.1086/426002, Hansen et al. (2008) doi:10.1111/j.1558-5646.2008.00412.x.
| Version: | 2.1.2 |
| Depends: | R (≥ 3.0.0), base, stats |
| Imports: | parallel, ape, memoise |
| Suggests: | knitr, rmarkdown, bookdown, testthat |
| Published: | 2019-03-21 |
| Author: | Bjørn Tore Kopperud [aut, cre], Jason Pienaar [aut], Kjetil Lysne Voje [aut], Steven Hecht Orzack [aut], Thomas F. Hansen [aut], Mark Grabowski [ctb] |
| Maintainer: | Bjørn Tore Kopperud <b.t.kopperud at nhm.uio.no> |
| BugReports: | http://github.com/kopperud/slouch/issues |
| License: | GPL-2 |
| URL: | http://github.com/kopperud/slouch |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | slouch results |
| Reference manual: | slouch.pdf |
| Vignettes: |
Examples |
| Package source: | slouch_2.1.2.tar.gz |
| Windows binaries: | r-devel: slouch_2.1.2.zip, r-devel-gcc8: slouch_2.1.2.zip, r-release: slouch_2.1.2.zip, r-oldrel: slouch_2.1.2.zip |
| OS X binaries: | r-release: slouch_2.1.2.tgz, r-oldrel: slouch_2.1.2.tgz |
| Old sources: | slouch archive |
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