CRAN Package Check Results for Package bnspatial

Last updated on 2020-01-20 01:50:16 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1 3.69 49.89 53.58 ERROR
r-devel-linux-x86_64-debian-gcc 1.1.1 2.73 57.77 60.50 OK
r-devel-linux-x86_64-fedora-clang 1.1.1 97.49 OK
r-devel-linux-x86_64-fedora-gcc 1.1.1 93.44 OK
r-devel-windows-ix86+x86_64 1.1 13.00 88.00 101.00 ERROR
r-devel-windows-ix86+x86_64-gcc8 1.1.1 13.00 129.00 142.00 OK
r-patched-linux-x86_64 1.1 2.90 46.47 49.37 ERROR
r-patched-solaris-x86 1.1.1 135.30 OK
r-release-linux-x86_64 1.1.1 3.14 68.96 72.10 OK
r-release-windows-ix86+x86_64 1.1.1 14.00 124.00 138.00 OK
r-release-osx-x86_64 1.1.1 OK
r-oldrel-windows-ix86+x86_64 1.1.1 5.00 56.00 61.00 ERROR
r-oldrel-osx-x86_64 1.1.1 ERROR

Check Details

Version: 1.1
Check: dependencies in R code
Result: NOTE
    Missing or unexported objects:
     'gRain::compile.CPTgrain' 'gRain::predict.grain'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64

Version: 1.1
Check: examples
Result: ERROR
    Running examples in 'bnspatial-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: bnspatial
    > ### Title: Spatialize the Bayesian network
    > ### Aliases: bnspatial
    >
    > ### ** Examples
    >
    > list2env(ConwyData, environment())
    <environment: R_GlobalEnv>
    >
    > network <- LandUseChange
    > spatialData <- c(ConwyLU, ConwySlope, ConwyStatus)
    > lookup <- LUclasses
    >
    > bn <- bnspatial(network, 'FinalLULC', spatialData, lookup)
    Error: 'compile.CPTgrain' is not an exported object from 'namespace:gRain'
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'bnspatial.Rmd' using rmarkdown
    Loading required package: raster
    Loading required package: sp
    Quitting from lines 97-118 (bnspatial.Rmd)
    Error: processing vignette 'bnspatial.Rmd' failed with diagnostics:
    'compile.CPTgrain' is not an exported object from 'namespace:gRain'
    --- failed re-building 'bnspatial.Rmd'
    
    SUMMARY: processing the following file failed:
     'bnspatial.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 1.1
Check: examples
Result: ERROR
    Running examples in 'bnspatial-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: bnspatial
    > ### Title: Spatialize the Bayesian network
    > ### Aliases: bnspatial
    >
    > ### ** Examples
    >
    > list2env(ConwyData, environment())
    <environment: R_GlobalEnv>
    >
    > network <- LandUseChange
    > spatialData <- c(ConwyLU, ConwySlope, ConwyStatus)
    > lookup <- LUclasses
    >
    > bn <- bnspatial(network, 'FinalLULC', spatialData, lookup)
    Error: 'compile.CPTgrain' is not an exported object from 'namespace:gRain'
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'bnspatial.Rmd' using rmarkdown
    Loading required package: raster
    Loading required package: sp
    Quitting from lines 97-118 (bnspatial.Rmd)
    Error: processing vignette 'bnspatial.Rmd' failed with diagnostics:
    'compile.CPTgrain' is not an exported object from 'namespace:gRain'
    --- failed re-building 'bnspatial.Rmd'
    
    SUMMARY: processing the following file failed:
     'bnspatial.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.1.1
Check: examples
Result: ERROR
    Running examples in 'bnspatial-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: bnspatial
    > ### Title: Spatialize the Bayesian network
    > ### Aliases: bnspatial
    >
    > ### ** Examples
    >
    > list2env(ConwyData, environment())
    <environment: R_GlobalEnv>
    >
    > network <- LandUseChange
    > spatialData <- c(ConwyLU, ConwySlope, ConwyStatus)
    > lookup <- LUclasses
    >
    > bn <- bnspatial(network, 'FinalLULC', spatialData, lookup)
    
    "CurrentLULC" points to:
     -> ConwyLU
    
    With states:
    forest arable other
    
    Represented by integer values:
    2 <-> 3 <-> 1
    ----------------------------------
    
    "Slope" points to:
     -> ConwySlope
    
    With states:
    flat moderate steep
    
    Discretized by intervals:
    -Inf <-> 1 <-> 7 <-> Inf
    ----------------------------------
    
    "LegalStatus" points to:
     -> ConwyStatus
    
    With states:
    public private protected
    
    Represented by integer values:
    4 <-> 3 <-> 1
    ----------------------------------
    Error in NextMethod("compile") : no method to invoke
    Calls: bnspatial ... querygrain.grain -> compile -> compile.grain -> NextMethod
    Execution halted
Flavors: r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.1.1
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Loading required package: raster
    Loading required package: sp
    Quitting from lines 93-114 (bnspatial.Rmd)
    Error: processing vignette 'bnspatial.Rmd' failed with diagnostics:
    no method to invoke
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 1.1.1
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: raster
    Loading required package: sp
    Quitting from lines 93-114 (bnspatial.Rmd)
    Error: processing vignette 'bnspatial.Rmd' failed with diagnostics:
    no method to invoke
    Execution halted
Flavor: r-oldrel-osx-x86_64