CRAN Package Check Results for Maintainer ‘Scott Chamberlain <myrmecocystus at gmail.com>’

Last updated on 2020-02-15 01:02:07 CET.

Package analogsea

Current CRAN status: NOTE: 7, OK: 6

Version: 0.8.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'aws.s3'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.8.0
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: 'ssh', 'aws.s3'
Flavor: r-patched-solaris-x86

Package bold

Current CRAN status: NOTE: 2, OK: 11

Version: 0.9.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘sangerseqR’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Package brranching

Current CRAN status: OK: 13

Package ccafs

Current CRAN status: OK: 13

Package citecorp

Current CRAN status: OK: 13

Package ckanr

Current CRAN status: OK: 13

Package conditionz

Current CRAN status: OK: 13

Package cowsay

Current CRAN status: OK: 13

Package crevents

Current CRAN status: OK: 13

Package crul

Current CRAN status: OK: 13

Package discgolf

Current CRAN status: OK: 13

Package elastic

Current CRAN status: NOTE: 1, OK: 12

Version: 1.1.0
Check: installed package size
Result: NOTE
     installed size is 5.0Mb
     sub-directories of 1Mb or more:
     examples 4.2Mb
Flavor: r-patched-solaris-x86

Package fauxpas

Current CRAN status: NOTE: 5, OK: 8

Version: 0.2.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘whisker’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package finch

Current CRAN status: ERROR: 1, NOTE: 4, OK: 8

Version: 0.3.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘rappdirs’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-oldrel-osx-x86_64

Version: 0.3.0
Check: package dependencies
Result: ERROR
    Package required and available but unsuitable version: ‘EML’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Package fulltext

Current CRAN status: ERROR: 2, OK: 11

Version: 1.4.0
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Package geoaxe

Current CRAN status: OK: 13

Package geojson

Current CRAN status: OK: 13

Package geojsonio

Current CRAN status: ERROR: 1, NOTE: 1, OK: 11

Version: 0.9.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘RPostgres’
Flavor: r-patched-solaris-x86

Version: 0.8.0
Check: tests
Result: ERROR
     Running ‘test-all.R’ [74s/77s]
    Running the tests in ‘tests/test-all.R’ failed.
    Complete output:
     > library("testthat")
     > library("geojsonio")
    
     Attaching package: 'geojsonio'
    
     The following object is masked from 'package:base':
    
     pretty
    
     > test_check("geojsonio")
     ── 1. Failure: as.json works with geojson class inputs (@test-as.json.R#52) ───
     unclass(as.json(e, verbose = FALSE)) not equal to "{\"type\":\"FeatureCollection\",\"crs\":{\"type\":\"name\",\"properties\":{\"name\":\"urn:ogc:def:crs:OGC:1.3:CRS84\"}},\"features\":[{\"type\":\"Feature\",\"id\":1,\"properties\":{\"dummy\":0},\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[-100,40],[-90,50],[-85,45],[-100,40]]]}},{\"type\":\"Feature\",\"id\":2,\"properties\":{\"dummy\":0},\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[-90,30],[-80,40],[-75,35],[-90,30]]]}}]}".
     1/1 mismatches
     x[1]: "{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"id\
     x[1]: ":1,\"properties\":{\"dummy\":0},\"geometry\":{\"type\":\"Polygon\",\"coor
     x[1]: dinates\":[[[-100,40],[-90,50],[-85,45],[-100,40]]]}},{\"type\":\"Feature\
     x[1]: ",\"id\":2,\"properties\":{\"dummy\":0},\"geometry\":{\"type\":\"Polygon\"
     x[1]: ,\"coordinates\":[[[-90,30],[-80,40],[-75,35],[-90,30]]]}}]}"
     y[1]: "{\"type\":\"FeatureCollection\",\"crs\":{\"type\":\"name\",\"properties\"
     y[1]: :{\"name\":\"urn:ogc:def:crs:OGC:1.3:CRS84\"}},\"features\":[{\"type\":\"F
     y[1]: eature\",\"id\":1,\"properties\":{\"dummy\":0},\"geometry\":{\"type\":\"Po
     y[1]: lygon\",\"coordinates\":[[[-100,40],[-90,50],[-85,45],[-100,40]]]}},{\"typ
     y[1]: e\":\"Feature\",\"id\":2,\"properties\":{\"dummy\":0},\"geometry\":{\"t...
    
     ── 2. Failure: geojson_read works with file inputs (@test-geojson_read.R#12) ──
     aa$crs inherits from `NULL` not `list`.
    
     ── 3. Failure: geojson_read works with file inputs (@test-geojson_read.R#16) ──
     sort(names(aa)) not equal to `top_names`.
     Lengths differ: 3 is not 4
    
     ── 4. Failure: geojson_read works with as.location inputs (@test-geojson_read.R#
     aa$crs inherits from `NULL` not `list`.
    
     ── 5. Failure: geojson_read works with as.location inputs (@test-geojson_read.R#
     sort(names(aa)) not equal to `top_names`.
     Lengths differ: 3 is not 4
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 395 | SKIPPED: 30 | WARNINGS: 0 | FAILED: 5 ]
     1. Failure: as.json works with geojson class inputs (@test-as.json.R#52)
     2. Failure: geojson_read works with file inputs (@test-geojson_read.R#12)
     3. Failure: geojson_read works with file inputs (@test-geojson_read.R#16)
     4. Failure: geojson_read works with as.location inputs (@test-geojson_read.R#38)
     5. Failure: geojson_read works with as.location inputs (@test-geojson_read.R#42)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-linux-x86_64

Package geojsonlint

Current CRAN status: ERROR: 1, OK: 12

Version: 0.3.0
Check: examples
Result: ERROR
    Running examples in 'geojsonlint-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: geojson_hint
    > ### Title: Validate GeoJSON using geojsonhint Javascript library
    > ### Aliases: geojson_hint
    >
    > ### ** Examples
    >
    > geojson_hint('{"type": "FooBar"}')
    [1] FALSE
    > geojson_hint('{ "type": "FeatureCollection" }')
    [1] FALSE
    > geojson_hint(
    + '{"type":"Point","geometry":{"type":"Point","coordinates":[-80,40]},"properties":{}}'
    + )
    [1] FALSE
    >
    > # A file
    > file <- system.file("examples", "zillow_or.geojson", package = "geojsonlint")
    > geojson_hint(as.location(file))
    [1] FALSE
    >
    > # A URL
    > url <- "https://raw.githubusercontent.com/glynnbird/usstatesgeojson/master/california.geojson"
    > geojson_hint(as.location(url))
    Error in curl::curl_fetch_memory(x$url$url, handle = x$url$handle) :
     Could not resolve host: raw.githubusercontent.com
    Calls: geojson_hint ... <Anonymous> -> <Anonymous> -> crul_fetch -> <Anonymous>
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Package getlandsat

Current CRAN status: OK: 13

Package gistr

Current CRAN status: OK: 13

Package hoardr

Current CRAN status: OK: 13

Package httpcode

Current CRAN status: OK: 13

Package httping

Current CRAN status: OK: 13

Package isdparser

Current CRAN status: NOTE: 5, OK: 8

Version: 0.3.0
Check: data for non-ASCII characters
Result: NOTE
     Note: found 104 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package jqr

Current CRAN status: NOTE: 2, OK: 11

Version: 1.1.0
Check: top-level files
Result: NOTE
    ‘configure’: /bin/bash is not portable
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package lawn

Current CRAN status: OK: 13

Package mapr

Current CRAN status: NOTE: 5, OK: 8

Version: 0.4.0
Check: data for non-ASCII characters
Result: NOTE
     Note: found 164 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package mregions

Current CRAN status: OK: 13

Package natserv

Current CRAN status: OK: 13

Package oai

Current CRAN status: OK: 13

Package openadds

Current CRAN status: OK: 13

Package originr

Current CRAN status: NOTE: 5, OK: 8

Version: 0.3.0
Check: data for non-ASCII characters
Result: NOTE
     Note: found 2 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package pangaear

Current CRAN status: OK: 13

Package pleiades

Current CRAN status: OK: 13

Package randgeo

Current CRAN status: OK: 13

Package rbhl

Current CRAN status: OK: 13

Package rbison

Current CRAN status: OK: 13

Package rcrossref

Current CRAN status: WARN: 2, OK: 11

Version: 0.9.2
Check: R files for syntax errors
Result: WARN
    Warnings in file 'R/crAddins.R':
     unable to translate '<U+25B2>' to native encoding
     unable to translate '<U+25BC>' to native encoding
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8

Package rdatacite

Current CRAN status: ERROR: 1, OK: 12

Version: 0.5.0
Check: tests
Result: ERROR
     Running 'test-all.R' [4s/5s]
    Running the tests in 'tests/test-all.R' failed.
    Complete output:
     > library("testthat")
     > test_check("rdatacite")
     Loading required package: rdatacite
     -- 1. Error: dc_client_prefixes works (@test-dc_client_prefixes.R#4) ----------
     Reader error: control characters are not allowed: #80 at 26431
     Backtrace:
     1. vcr::use_cassette(...)
     2. vcr::insert_cassette(...)
     3. Cassette$new(...)
     4. .subset2(public_bind_env, "initialize")(...)
     5. self$http_interactions()
     8. self$previously_recorded_interactions()
     14. self$deserialized_hash()
     15. self$serializer$deserialize_path()
     16. yaml::yaml.load(str)
    
     -- 2. Error: dc_clients works (@test-dc_clients.R#4) --------------------------
     Reader error: control characters are not allowed: #80 at 5587
     Backtrace:
     1. vcr::use_cassette(...)
     2. vcr::insert_cassette(...)
     3. Cassette$new(...)
     4. .subset2(public_bind_env, "initialize")(...)
     5. self$http_interactions()
     8. self$previously_recorded_interactions()
     14. self$deserialized_hash()
     15. self$serializer$deserialize_path()
     16. yaml::yaml.load(str)
    
     == testthat results ===========================================================
     [ OK: 47 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Error: dc_client_prefixes works (@test-dc_client_prefixes.R#4)
     2. Error: dc_clients works (@test-dc_clients.R#4)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Package rdpla

Current CRAN status: OK: 13

Package rdryad

Current CRAN status: OK: 13

Package request

Current CRAN status: OK: 13

Package rerddap

Current CRAN status: ERROR: 1, OK: 12

Version: 0.6.5
Check: tests
Result: ERROR
     Running 'test-all.R' [27s]
    Running the tests in 'tests/test-all.R' failed.
    Complete output:
     > library("testthat")
     > library("rerddap")
     >
     > #Sys.setenv(RERDDAP_CACHE_PATH_SUFFIX = "rerddap")
     > cache_setup(temp_dir = TRUE)
     [1] "D:\\temp\\Rtmp8SpUrk/R/rerddap"
     >
     > test_check("rerddap")
     -- 1. Error: convert_units works (@test-convert_units.R#15) -------------------
     Timeout was reached: [upwell.pfeg.noaa.gov] Operation timed out after 10015 milliseconds with 0 out of 0 bytes received
     Backtrace:
     1. testthat::expect_equal(convert_units(udunits = "degC"), "Cel")
     4. rerddap::convert_units(udunits = "degC")
     5. cli$get(query = args)
     6. private$make_request(rr)
     7. crul:::crul_fetch(opts)
     8. curl::curl_fetch_memory(x$url$url, handle = x$url$handle)
    
     == testthat results ===========================================================
     [ OK: 36 | SKIPPED: 19 | WARNINGS: 0 | FAILED: 1 ]
     1. Error: convert_units works (@test-convert_units.R#15)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Package rgbif

Current CRAN status: WARN: 1, NOTE: 1, OK: 11

Version: 2.1.0
Check: installed package size
Result: NOTE
     installed size is 5.1Mb
     sub-directories of 1Mb or more:
     doc 1.7Mb
     help 2.3Mb
Flavor: r-patched-solaris-x86

Version: 2.0.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: S3 methods '[.fun_list', '[.grouped_df', 'all.equal.tbl_df', 'anti_join.data.frame', 'anti_join.tbl_df', 'arrange.data.frame', 'arrange.default', 'arrange.grouped_df', 'arrange.tbl_df', 'arrange_.data.frame', 'arrange_.tbl_df', 'as.data.frame.grouped_df', 'as.data.frame.rowwise_df', 'as.data.frame.tbl_cube', 'as.table.tbl_cube', 'as.tbl.data.frame', 'as.tbl.tbl', 'as.tbl_cube.array', 'as.tbl_cube.data.frame', 'as.tbl_cube.matrix', 'as.tbl_cube.table', 'as_tibble.grouped_df', 'as_tibble.tbl_cube', 'auto_copy.tbl_cube', 'auto_copy.tbl_df', 'cbind.grouped_df', 'collapse.data.frame', 'collect.data.frame', 'common_by.NULL', 'common_by.character', 'common_by.default', 'common_by.list', 'compute.data.frame', 'copy_to.DBIConnection', 'copy_to.src_local', 'default_missing.data.frame', 'default_missing.default', 'dim.tbl_cube', 'distinct.data.frame', 'distinct.default', 'distinct.grouped_df', 'distinct.tbl_df', 'distinct_.data.frame', 'distinct_.grouped_df', 'distinct_.tbl_df', 'do.NULL', 'do.da [... truncated]
Flavor: r-oldrel-windows-ix86+x86_64

Package ritis

Current CRAN status: OK: 13

Package rjsonapi

Current CRAN status: NOTE: 5, OK: 8

Version: 0.1.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘crul’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package rnoaa

Current CRAN status: OK: 13

Package rnpn

Current CRAN status: OK: 13

Package rorcid

Current CRAN status: OK: 13

Package rphylopic

Current CRAN status: OK: 13

Package rplos

Current CRAN status: OK: 13

Package rredlist

Current CRAN status: OK: 13

Package rsnps

Current CRAN status: OK: 13

Package rvertnet

Current CRAN status: OK: 13

Package scrubr

Current CRAN status: NOTE: 5, OK: 8

Version: 0.3.0
Check: data for non-ASCII characters
Result: NOTE
     Note: found 57 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package sofa

Current CRAN status: OK: 13

Package solrium

Current CRAN status: OK: 13

Package spocc

Current CRAN status: ERROR: 3, OK: 10

Version: 1.0.2
Check: tests
Result: ERROR
     Running 'testthat.R' [78s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library('testthat')
     > test_check("spocc")
     Loading required package: spocc
     -- 1. Failure: occ2df works when eventDate gone - another eg (@test-occ2df.R#44)
     Names of `outdf` ('name', 'longitude', 'latitude', 'prov', 'key') don't match 'name', 'longitude', 'latitude', 'prov', 'key', 'date'
    
     == testthat results ===========================================================
     [ OK: 100 | SKIPPED: 14 | WARNINGS: 24 | FAILED: 1 ]
     1. Failure: occ2df works when eventDate gone - another eg (@test-occ2df.R#44)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0.2
Check: tests
Result: ERROR
     Running 'testthat.R' [91s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library('testthat')
     > test_check("spocc")
     Loading required package: spocc
     -- 1. Failure: has_coords works with all data sources as planned (@test-has_coor
     anyNA(dd$inat$data[[1]]$longitude) isn't false.
    
     -- 2. Failure: has_coords works with all data sources as planned (@test-has_coor
     anyNA(dd$inat$data[[1]]$latitude) isn't false.
    
     -- 3. Failure: occ2df works when eventDate gone - another eg (@test-occ2df.R#44)
     Names of `outdf` ('name', 'longitude', 'latitude', 'prov', 'key') don't match 'name', 'longitude', 'latitude', 'prov', 'key', 'date'
    
     == testthat results ===========================================================
     [ OK: 98 | SKIPPED: 14 | WARNINGS: 24 | FAILED: 3 ]
     1. Failure: has_coords works with all data sources as planned (@test-has_coords.R#44)
     2. Failure: has_coords works with all data sources as planned (@test-has_coords.R#45)
     3. Failure: occ2df works when eventDate gone - another eg (@test-occ2df.R#44)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-windows-ix86+x86_64

Version: 1.0.2
Check: tests
Result: ERROR
     Running 'testthat.R' [97s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library('testthat')
     > test_check("spocc")
     Loading required package: spocc
     -- 1. Failure: occ2df works when eventDate gone - another eg (@test-occ2df.R#44)
     Names of `outdf` ('name', 'longitude', 'latitude', 'prov', 'key') don't match 'name', 'longitude', 'latitude', 'prov', 'key', 'date'
    
     == testthat results ===========================================================
     [ OK: 100 | SKIPPED: 14 | WARNINGS: 24 | FAILED: 1 ]
     1. Failure: occ2df works when eventDate gone - another eg (@test-occ2df.R#44)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Package taxize

Current CRAN status: NOTE: 5, OK: 8

Version: 0.9.92
Check: data for non-ASCII characters
Result: NOTE
     Note: found 1 marked UTF-8 string
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package traits

Current CRAN status: OK: 13

Package wellknown

Current CRAN status: OK: 13

Package worrms

Current CRAN status: OK: 13