Last updated on 2020-02-15 01:01:38 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.7.5 | 5.88 | 102.53 | 108.41 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.7.5 | 4.66 | 72.93 | 77.59 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.7.5 | 133.50 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.7.5 | 130.07 | OK | |||
| r-devel-windows-ix86+x86_64 | 0.7.5 | 11.00 | 126.00 | 137.00 | OK | |
| r-devel-windows-ix86+x86_64-gcc8 | 0.7.5 | 16.00 | 122.00 | 138.00 | OK | |
| r-patched-linux-x86_64 | 0.7.5 | 4.69 | 93.76 | 98.45 | OK | |
| r-patched-solaris-x86 | 0.7.5 | 64.60 | WARN | |||
| r-release-linux-x86_64 | 0.7.5 | 4.70 | 97.69 | 102.39 | OK | |
| r-release-windows-ix86+x86_64 | 0.7.5 | 9.00 | 125.00 | 134.00 | OK | |
| r-release-osx-x86_64 | 0.7.5 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 0.7.5 | 7.00 | 125.00 | 132.00 | OK | |
| r-oldrel-osx-x86_64 | 0.7.5 | OK |
Version: 0.7.5
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘rodeoVignette.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
/home/ripley/developerstudio12.6/bin/f95 -PIC -O -libmil -xtarget=native -xcache=generic -nofstore -c /home/ripley/R/packages/tests32/rodeo.Rcheck/vign_test/rodeo/vignettes/vignetteData/fortran/functionsCode.f95 -o /home/ripley/R/packages/tests32/rodeo.Rcheck/vign_test/rodeo/vignettes/vignetteData/fortran/functionsCode.o
/home/ripley/developerstudio12.6/bin/f95 -PIC -O -libmil -xtarget=native -xcache=generic -nofstore -c /tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95 -o /tmp/RtmpPEaGVM/rodeo4d7c37c1335.o
module dimensions_and_indices
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 3, Column = 8: ERROR: The compiler has detected errors in module "DIMENSIONS_AND_INDICES". No module information file will be created for this module.
integer, pointer:: bac => ivar0D(1)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 22, Column = 39: ERROR: Illegal pointer assignment.
integer, pointer:: sub => ivar0D(2)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 23, Column = 39: ERROR: Illegal pointer assignment.
integer, pointer:: mu => ipar0D(1)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 26, Column = 38: ERROR: Illegal pointer assignment.
integer, pointer:: half => ipar0D(2)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 27, Column = 40: ERROR: Illegal pointer assignment.
integer, pointer:: yield => ipar0D(3)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 28, Column = 41: ERROR: Illegal pointer assignment.
integer, pointer:: vol => ipar0D(4)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 29, Column = 39: ERROR: Illegal pointer assignment.
integer, pointer:: flow => ipar0D(5)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 30, Column = 40: ERROR: Illegal pointer assignment.
integer, pointer:: sub_in => ipar0D(6)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 31, Column = 42: ERROR: Illegal pointer assignment.
integer, pointer:: bac => ivar(1)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 38, Column = 37: ERROR: Illegal pointer assignment.
integer, pointer:: sub => ivar(2)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 39, Column = 37: ERROR: Illegal pointer assignment.
integer, pointer:: mu => ipar(1)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 42, Column = 36: ERROR: Illegal pointer assignment.
integer, pointer:: half => ipar(2)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 43, Column = 38: ERROR: Illegal pointer assignment.
integer, pointer:: yield => ipar(3)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 44, Column = 39: ERROR: Illegal pointer assignment.
integer, pointer:: vol => ipar(4)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 45, Column = 37: ERROR: Illegal pointer assignment.
integer, pointer:: flow => ipar(5)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 46, Column = 38: ERROR: Illegal pointer assignment.
integer, pointer:: sub_in => ipar(6)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 47, Column = 40: ERROR: Illegal pointer assignment.
integer, pointer:: growth => ipro(1)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 50, Column = 40: ERROR: Illegal pointer assignment.
integer, pointer:: inout => ipro(2)
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 51, Column = 39: ERROR: Illegal pointer assignment.
use dimensions_and_indices
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 60, Column = 7: ERROR: "DIMENSIONS_AND_INDICES" is specified as the module name on a USE statement, but the compiler cannot find it.
double precision, dimension(NVAR*NBOX), intent(in):: var
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 66, Column = 31: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "NVAR".
double precision, dimension(NPAR*NBOX), intent(in):: par
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 67, Column = 31: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "NPAR".
double precision, dimension(NPRO*NBOX), intent(out):: pro
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 70, Column = 31: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "NPRO".
ivar= (ivar0D - 1) * NBOX + iBox
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 94, Column = 5: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IVAR".
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 94, Column = 12: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IVAR0D".
ipar= (ipar0D - 1) * NBOX + iBox
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 95, Column = 5: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IPAR".
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 95, Column = 12: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IPAR0D".
par(p%mu) * monod(var(v%sub), par(p%half)) * var(v%bac)&
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 99, Column = 11: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "P".
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 99, Column = 29: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "V".
ivar= (ivar0D - 1) * NBOX + iBox
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 114, Column = 5: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IVAR".
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 114, Column = 12: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IVAR0D".
ipar= (ipar0D - 1) * NBOX + iBox
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 115, Column = 5: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IPAR".
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 115, Column = 12: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IPAR0D".
ipro= (ipro0D - 1) * NBOX + iBox
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 116, Column = 5: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IPRO".
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 116, Column = 12: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "IPRO0D".
pro(r%growth) * (1d0) + pro(r%inout) * (-var(v%bac))&
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 120, Column = 12: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "R".
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 120, Column = 54: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "V".
pro(r%growth) * (-1d0 / par(p%yield)) + pro(r%inout) *&
^
"/tmp/RtmpPEaGVM/rodeo4d7c37c1335.f95", Line = 123, Column = 36: ERROR: IMPLICIT NONE is specified in the local scope, therefore an explicit type must be specified for data object "P".
f90comp: 128 SOURCE LINES
f90comp: 38 ERRORS, 0 WARNINGS, 0 OTHER MESSAGES, 0 ANSI
*** Error code 2
make: Fatal error: Command failed for target `/tmp/RtmpPEaGVM/rodeo4d7c37c1335.o'
Current working directory /tmp/RtmpPEaGVM
Quitting from lines 409-409 (rodeoVignette.Rmd)
Error: processing vignette 'rodeoVignette.Rmd' failed with diagnostics:
Compilation failed.
--- failed re-building ‘rodeoVignette.Rmd’
SUMMARY: processing the following file failed:
‘rodeoVignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86