An integrative method of analyzing multi omics data that conducts enrichment analysis of annotated gene sets. 'ActivePathways' uses a statistical data fusion approach, rationalizes contributing evidence and highlights associated genes, improving systems-level understanding of cellular organization in health and disease.
| Version: | 1.0.1 |
| Depends: | R (≥ 3.2.3) |
| Imports: | metap, data.table, ggplot2 |
| Suggests: | testthat, knitr, rmarkdown |
| Published: | 2019-05-04 |
| Author: | Helen Zhu [aut, cre], Juri Reimand [aut], Jonathan Barenboim [aut] |
| Maintainer: | Helen Zhu <helen.zhu at oicr.on.ca> |
| BugReports: | https://github.com/reimandlab/ActivePathways/issues |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | ActivePathways results |
| Reference manual: | ActivePathways.pdf |
| Vignettes: |
ActivePathways enrichmentMap |
| Package source: | ActivePathways_1.0.1.tar.gz |
| Windows binaries: | r-devel: ActivePathways_1.0.1.zip, r-devel-gcc8: ActivePathways_1.0.1.zip, r-release: ActivePathways_1.0.1.zip, r-oldrel: ActivePathways_1.0.1.zip |
| OS X binaries: | r-release: ActivePathways_1.0.1.tgz, r-oldrel: ActivePathways_1.0.1.tgz |
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