Automated compound deconvolution, alignment across samples, and identification of metabolites by spectral library matching in Gas Chromatography - Mass spectrometry (GC-MS) untargeted metabolomics. Outputs a table with compound names, matching scores and the integrated area of the compound for each sample. Package implementation is described in Domingo-Almenara et al. (2016) <doi:10.1021/acs.analchem.6b02927>.
| Version: | 1.1.0 |
| Depends: | R (≥ 2.10), Rcpp |
| Imports: | ncdf4, nnls, igraph, signal, quantreg, XML, methods |
| Suggests: | R.rsp, mzR |
| Published: | 2018-07-11 |
| Author: | Xavier Domingo-Almenara [aut, cre, cph], Sara Samino [aut], Maria Vinaixa [aut], Alexandre Perera [aut, ths], Jesus Brezmes [aut, ths], Oscar Yanes [aut, ths] |
| Maintainer: | Xavier Domingo-Almenara <xdomingo at scripps.edu> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | http://metabolomicsplatform.com/ |
| NeedsCompilation: | yes |
| Citation: | erah citation info |
| Materials: | NEWS |
| CRAN checks: | erah results |
| Reference manual: | erah.pdf |
| Vignettes: |
eRah Manual |
| Package source: | erah_1.1.0.tar.gz |
| Windows binaries: | r-devel: erah_1.1.0.zip, r-devel-gcc8: erah_1.1.0.zip, r-release: erah_1.1.0.zip, r-oldrel: erah_1.1.0.zip |
| OS X binaries: | r-release: erah_1.1.0.tgz, r-oldrel: erah_1.1.0.tgz |
| Old sources: | erah archive |
| Reverse depends: | baitmet |
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