CRAN Package Check Results for Package MetaIntegrator

Last updated on 2020-03-27 00:49:27 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1.3 14.27 155.73 170.00 OK
r-devel-linux-x86_64-debian-gcc 2.1.3 11.82 141.47 153.29 OK
r-devel-linux-x86_64-fedora-clang 2.1.3 189.37 NOTE
r-devel-linux-x86_64-fedora-gcc 2.1.3 174.01 NOTE
r-devel-windows-ix86+x86_64 2.1.3 29.00 138.00 167.00 OK
r-devel-windows-ix86+x86_64-gcc8 2.1.3 29.00 155.00 184.00 OK
r-patched-linux-x86_64 2.1.3 12.12 138.93 151.05 OK
r-patched-solaris-x86 2.1.3 230.50 NOTE
r-release-linux-x86_64 2.1.3 10.33 136.43 146.76 OK
r-release-windows-ix86+x86_64 2.1.3 38.00 205.00 243.00 OK
r-release-osx-x86_64 2.1.3 WARN
r-oldrel-osx-x86_64 2.1.3 ERROR

Check Details

Version: 2.1.3
Check: package dependencies
Result: NOTE
    Imports includes 35 non-default packages.
    Importing from so many packages makes the package vulnerable to any of
    them becoming unavailable. Move as many as possible to Suggests and
    use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 2.1.3
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘BiocManager’ ‘DT’ ‘GEOmetadb’ ‘RMySQL’ ‘RSQLite’ ‘gplots’ ‘pheatmap’
     ‘readr’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64

Version: 2.1.3
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘BiocStyle’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 2.1.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘MetaIntegrator.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 29-30 (MetaIntegrator.Rmd)
    Error: processing vignette 'MetaIntegrator.Rmd' failed with diagnostics:
    there is no package called 'BiocStyle'
    --- failed re-building ‘MetaIntegrator.Rmd’
    
    --- re-building ‘MetaIntegratorRealExample.Rmd’ using rmarkdown_notangle
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘MetaIntegratorRealExample.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘MetaIntegrator.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 2.1.3
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-oldrel-osx-x86_64