CRAN Package Check Results for Package cr17

Last updated on 2020-03-27 00:49:18 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.0 10.78 83.10 93.88 ERROR
r-devel-linux-x86_64-debian-gcc 0.1.0 7.99 62.33 70.32 ERROR
r-devel-linux-x86_64-fedora-clang 0.1.0 115.58 ERROR
r-devel-linux-x86_64-fedora-gcc 0.1.0 103.52 ERROR
r-devel-windows-ix86+x86_64 0.1.0 29.00 92.00 121.00 ERROR
r-devel-windows-ix86+x86_64-gcc8 0.1.0 23.00 110.00 133.00 OK
r-patched-linux-x86_64 0.1.0 7.92 81.88 89.80 OK
r-patched-solaris-x86 0.1.0 156.20 ERROR
r-release-linux-x86_64 0.1.0 7.88 81.93 89.81 OK
r-release-windows-ix86+x86_64 0.1.0 33.00 137.00 170.00 OK
r-release-osx-x86_64 0.1.0 OK
r-oldrel-windows-ix86+x86_64 0.1.0 22.00 148.00 170.00 OK
r-oldrel-osx-x86_64 0.1.0 OK

Check Details

Version: 0.1.0
Check: examples
Result: ERROR
    Running examples in 'cr17-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: fitCuminc
    > ### Title: Cumulative Incidences Curves
    > ### Aliases: fitCuminc
    >
    > ### ** Examples
    >
    > fitCuminc(time = LUAD$time, risk = LUAD$event, group = LUAD$gender, cens = "alive")
    19 cases omitted due to missing values
    Warning in cuminc(ftime = time, fstatus = risk, group = group, cencode = cens) :
     NAs introduced by coercion
    Error in cuminc(ftime = time, fstatus = risk, group = group, cencode = cens) :
     NAs in foreign function call (arg 3)
    Calls: fitCuminc -> cuminc
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.1.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'vignette.Rmd' using rmarkdown
    Warning in cuminc(ftime = time, fstatus = risk, group = group, cencode = cens) :
     NAs introduced by coercion
    Quitting from lines 176-180 (vignette.Rmd)
    Error: processing vignette 'vignette.Rmd' failed with diagnostics:
    NAs in foreign function call (arg 3)
    --- failed re-building 'vignette.Rmd'
    
    SUMMARY: processing the following file failed:
     'vignette.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.1.0
Check: examples
Result: ERROR
    Running examples in ‘cr17-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: fitCuminc
    > ### Title: Cumulative Incidences Curves
    > ### Aliases: fitCuminc
    >
    > ### ** Examples
    >
    > fitCuminc(time = LUAD$time, risk = LUAD$event, group = LUAD$gender, cens = "alive")
    19 cases omitted due to missing values
    Warning in cuminc(ftime = time, fstatus = risk, group = group, cencode = cens) :
     NAs introduced by coercion
    Error in cuminc(ftime = time, fstatus = risk, group = group, cencode = cens) :
     NAs in foreign function call (arg 3)
    Calls: fitCuminc -> cuminc
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86

Version: 0.1.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘vignette.Rmd’ using rmarkdown
    Warning in cuminc(ftime = time, fstatus = risk, group = group, cencode = cens) :
     NAs introduced by coercion
    Quitting from lines 176-180 (vignette.Rmd)
    Error: processing vignette 'vignette.Rmd' failed with diagnostics:
    NAs in foreign function call (arg 3)
    --- failed re-building ‘vignette.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘vignette.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.1.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘vignette.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in cuminc(ftime = time, fstatus = risk, group = group, cencode = cens) :
     NAs introduced by coercion
    Quitting from lines 176-180 (vignette.Rmd)
    Error: processing vignette 'vignette.Rmd' failed with diagnostics:
    NAs in foreign function call (arg 3)
    --- failed re-building ‘vignette.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘vignette.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86