CRAN Package Check Results for Package surveillance

Last updated on 2020-03-27 00:49:38 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.18.0 74.67 553.09 627.76 NOTE
r-devel-linux-x86_64-debian-gcc 1.18.0 56.35 407.77 464.12 NOTE
r-devel-linux-x86_64-fedora-clang 1.18.0 787.01 NOTE
r-devel-linux-x86_64-fedora-gcc 1.18.0 720.65 OK
r-devel-windows-ix86+x86_64 1.17.3 111.00 550.00 661.00 ERROR --no-vignettes
r-devel-windows-ix86+x86_64-gcc8 1.17.3 124.00 569.00 693.00 NOTE --no-vignettes
r-patched-linux-x86_64 1.18.0 62.22 490.61 552.83 NOTE
r-patched-solaris-x86 1.18.0 914.90 NOTE
r-release-linux-x86_64 1.18.0 59.25 487.85 547.10 NOTE
r-release-windows-ix86+x86_64 1.18.0 165.00 633.00 798.00 NOTE --no-vignettes
r-release-osx-x86_64 1.18.0 NOTE
r-oldrel-windows-ix86+x86_64 1.18.0 141.00 674.00 815.00 NOTE --no-vignettes
r-oldrel-osx-x86_64 1.18.0 NOTE

Check Details

Version: 1.18.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'INLA'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.18.0
Check: installed package size
Result: NOTE
     installed size is 8.5Mb
     sub-directories of 1Mb or more:
     R 1.7Mb
     doc 2.2Mb
     libs 2.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.17.3
Flags: --no-vignettes
Check: installed package size
Result: NOTE
     installed size is 8.3Mb
     sub-directories of 1Mb or more:
     R 1.8Mb
     doc 2.3Mb
     help 1.0Mb
     libs 1.7Mb
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8

Version: 1.17.3
Flags: --no-vignettes
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'surveillance-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: epidata_plot
    > ### Title: Plotting the Evolution of an Epidemic
    > ### Aliases: plot.epidata plot.summary.epidata stateplot
    > ### Keywords: hplot methods spatial
    >
    > ### ** Examples
    >
    > data("hagelloch")
    > (s <- summary(hagelloch))
    
    AN SIR EPIDEMIC
     Time range: 0 -- 92.5452383686788
     Number of individuals: 188
     1 initially infected individuals:
     "184"
     0 never infected individuals
     Size of the epidemic: 187
    
    $ counters ('data.frame', 376 x 6 ): evolution of the epidemic:
     time type id nSusceptible nInfectious nRemoved
    1 0.000000 187 1 0
    2 1.136356 I 173 186 2 0
    3 7.197762 R 173 186 1 1
     [....]
    375 85.688298 I 141 0 1 187
    376 92.545238 R 141 0 0 188
    
    >
    > # rudimentary stateplot
    > stateplot(s, id = "187")
    Warning in xy.coords(x, y, setLab = FALSE) : NAs introduced by coercion
    Error in approxfun(x, y[-if (right) n1 else 1], method = "constant", yleft = y[1L], :
     zero non-NA points
    Calls: stateplot -> stepfun -> approxfun
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.17.3
Flags: --no-vignettes
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'surveillance-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: epidata_plot
    > ### Title: Plotting the Evolution of an Epidemic
    > ### Aliases: plot.epidata plot.summary.epidata stateplot
    > ### Keywords: hplot methods spatial
    >
    > ### ** Examples
    >
    > data("hagelloch")
    > (s <- summary(hagelloch))
    
    AN SIR EPIDEMIC
     Time range: 0 -- 92.5452383686788
     Number of individuals: 188
     1 initially infected individuals:
     "184"
     0 never infected individuals
     Size of the epidemic: 187
    
    $ counters ('data.frame', 376 x 6 ): evolution of the epidemic:
     time type id nSusceptible nInfectious nRemoved
    1 0.000000 187 1 0
    2 1.136356 I 173 186 2 0
    3 7.197762 R 173 186 1 1
     [....]
    375 85.688298 I 141 0 1 187
    376 92.545238 R 141 0 0 188
    
    >
    > # rudimentary stateplot
    > stateplot(s, id = "187")
    Warning in xy.coords(x, y, setLab = FALSE) : NAs introduced by coercion
    Error in approxfun(x, y[-if (right) n1 else 1], method = "constant", yleft = y[1L], :
     zero non-NA points
    Calls: stateplot -> stepfun -> approxfun
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.18.0
Flags: --no-vignettes
Check: installed package size
Result: NOTE
     installed size is 8.1Mb
     sub-directories of 1Mb or more:
     R 1.7Mb
     doc 2.2Mb
     libs 1.7Mb
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.18.0
Flags: --no-vignettes
Check: dependencies in R code
Result: NOTE
    Missing or unexported object: 'grDevices::hcl.colors'
Flavor: r-oldrel-windows-ix86+x86_64

Version: 1.18.0
Check: dependencies in R code
Result: NOTE
    Missing or unexported object: ‘grDevices::hcl.colors’
Flavor: r-oldrel-osx-x86_64