UCSCXenaTools: Download and Explore Datasets from UCSC Xena Data Hubs

Download and explore datasets from UCSC Xena data hubs, which are a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others. Databases are normalized so they can be combined, linked, filtered, explored and downloaded.

Version: 1.3.1
Depends: R (≥ 3.5)
Imports: httr, readr, methods, utils, dplyr, magrittr, jsonlite, rlang
Suggests: DT, knitr, rmarkdown, prettydoc, shiny, shinydashboard, testthat (≥ 2.1.0), covr
Published: 2020-03-18
Author: Shixiang Wang ORCID iD [aut, cre], Xue-Song Liu ORCID iD [aut], Martin Morgan [ctb], Christine Stawitz [rev] (Christine reviewed the package for ropensci, see <https://github.com/ropensci/software-review/issues/315>), Carl Ganz [rev] (Carl reviewed the package for ropensci, see <https://github.com/ropensci/software-review/issues/315>)
Maintainer: Shixiang Wang <w_shixiang at 163.com>
BugReports: https://github.com/ropensci/UCSCXenaTools/issues
License: GPL-3
URL: https://docs.ropensci.org/UCSCXenaTools, https://github.com/ropensci/UCSCXenaTools
NeedsCompilation: no
Citation: UCSCXenaTools citation info
Materials: README NEWS
CRAN checks: UCSCXenaTools results


Reference manual: UCSCXenaTools.pdf
Vignettes: Basic usage
Package source: UCSCXenaTools_1.3.1.tar.gz
Windows binaries: r-devel: UCSCXenaTools_1.3.0.zip, r-devel-gcc8: UCSCXenaTools_1.3.0.zip, r-release: UCSCXenaTools_1.3.1.zip, r-oldrel: UCSCXenaTools_1.3.1.zip
OS X binaries: r-release: UCSCXenaTools_1.3.1.tgz, r-oldrel: UCSCXenaTools_1.3.1.tgz
Old sources: UCSCXenaTools archive

Reverse dependencies:

Reverse imports: UCSCXenaShiny


Please use the canonical form https://CRAN.R-project.org/package=UCSCXenaTools to link to this page.