Tools for extraction and analysis of various n-grams (k-mers) derived from biological sequences (proteins or nucleic acids). Contains QuiPT (quick permutation test) for fast feature-filtering of the n-gram data.
Version: | 1.6.1 |
Depends: | R (≥ 3.0.0), slam |
Imports: | bit, combinat, entropy, partitions |
Suggests: | ggplot2, knitr, testthat |
Published: | 2020-01-08 |
Author: | Michal Burdukiewicz
|
Maintainer: | Michal Burdukiewicz <michalburdukiewicz at gmail.com> |
BugReports: | https://github.com/michbur/biogram/issues |
License: | GPL-3 |
URL: | https://github.com/michbur/biogram |
NeedsCompilation: | no |
Citation: | biogram citation info |
Materials: | README ChangeLog |
CRAN checks: | biogram results |
Reference manual: | biogram.pdf |
Vignettes: |
biogram package - an overview |
Package source: | biogram_1.6.1.tar.gz |
Windows binaries: | r-devel: biogram_1.6.1.zip, r-devel-gcc8: biogram_1.6.1.zip, r-release: biogram_1.6.1.zip, r-oldrel: biogram_1.6.1.zip |
OS X binaries: | r-release: biogram_1.6.1.tgz, r-oldrel: biogram_1.6.1.tgz |
Old sources: | biogram archive |
Reverse imports: | AmyloGram |
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