Population genetic analyses for hierarchical analysis of partially clonal populations built upon the architecture of the 'adegenet' package. Originally described in Kamvar, Tabima, and Grünwald (2014) <doi:10.7717/peerj.281> with version 2.0 described in Kamvar, Brooks, and Grünwald (2015) <doi:10.3389/fgene.2015.00208>.
| Version: | 2.8.5 |
| Depends: | R (≥ 2.15.1), adegenet (≥ 2.0.0) |
| Imports: | stats, graphics, grDevices, utils, vegan, ggplot2, phangorn, ape (≥ 3.1-1), igraph (≥ 1.0.0), methods, ade4, pegas, polysat, dplyr (≥ 0.4), rlang, boot, shiny, magrittr |
| Suggests: | testthat, knitr, rmarkdown, poweRlaw, cowplot, RClone |
| Published: | 2020-02-25 |
| Author: | Zhian N. Kamvar 
[cre, aut],
Javier F. Tabima
[aut],
Sydney E. Everhart
[ctb, dtc],
Jonah C. Brooks [aut],
Stacy A. Krueger-Hadfield
[ctb],
Erik Sotka [ctb],
Brian J. Knaus
[ctb],
Patrick G. Meirmans
[ctb],
Frédéric D. Chevalier
[ctb],
Niklaus J. Grünwald
[ths] |
| Maintainer: | Zhian N. Kamvar <zkamvar at gmail.com> |
| BugReports: | https://github.com/grunwaldlab/poppr/issues |
| License: | GPL-2 | GPL-3 |
| URL: | https://grunwaldlab.github.io/poppr, https://github.com/grunwaldlab/poppr, https://grunwaldlab.github.io/Population_Genetics_in_R/ |
| NeedsCompilation: | yes |
| Citation: | poppr citation info |
| Materials: | README NEWS |
| CRAN checks: | poppr results |
| Reference manual: | poppr.pdf |
| Vignettes: |
Multilocus Genotype Analysis Data Import and Manipulation Algorightms and Equations |
| Package source: | poppr_2.8.5.tar.gz |
| Windows binaries: | r-devel: poppr_2.8.5.zip, r-devel-gcc8: poppr_2.8.5.zip, r-release: poppr_2.8.5.zip, r-oldrel: poppr_2.8.5.zip |
| OS X binaries: | r-release: poppr_2.8.5.tgz, r-oldrel: poppr_2.8.5.tgz |
| Old sources: | poppr archive |
| Reverse depends: | popprxl |
| Reverse suggests: | adegenet, vcfR |
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