sybilcycleFreeFlux: Cycle-Free Flux Balance Analysis (CycleFreeFlux)

Implement cycle-Free flux balance analysis (CycleFreeFlux), cycle-free flux variability, and Random Sampling of solution space. Desouki, A. A., Jarre, F., Gelius-Dietrich, G., & Lercher, M. J. (2015). CycleFreeFlux: efficient removal of thermodynamically infeasible loops from flux distributions. Bioinformatics, 31(13), 2159-2165. <>. Flux balance analysis is a technique to find fluxes in metabolic models at steady state. It is described in Orth, J.D., Thiele, I. and Palsson, B.O. What is flux balance analysis? Nat. Biotech. 28, 245-248 (2010).

Version: 2.0.1
Depends: R (≥ 3.0.3), sybil, Matrix, MASS
Imports: methods
Suggests: cplexAPI (≥ 1.2.6), glpkAPI (≥ 1.2.1)
Published: 2019-12-15
Author: Abdelmoneim Amer Desouki [aut, cre]
Maintainer: Abdelmoneim Amer Desouki <abdelmoneim.amer at>
License: GPL-3
NeedsCompilation: no
Materials: NEWS
CRAN checks: sybilcycleFreeFlux results


Reference manual: sybilcycleFreeFlux.pdf
Package source: sybilcycleFreeFlux_2.0.1.tar.gz
Windows binaries: r-devel:, r-devel-gcc8:, r-release:, r-oldrel:
OS X binaries: r-release: sybilcycleFreeFlux_2.0.1.tgz, r-oldrel: sybilcycleFreeFlux_2.0.1.tgz
Old sources: sybilcycleFreeFlux archive


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