Last updated on 2020-07-02 02:09:44 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.4 | 30.76 | 102.82 | 133.58 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.4 | 26.10 | 72.55 | 98.65 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.4 | 165.17 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.4 | 161.08 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.4 | 86.00 | 147.00 | 233.00 | OK | |
| r-patched-linux-x86_64 | 1.4 | 30.76 | 99.42 | 130.18 | OK | |
| r-patched-solaris-x86 | 1.4 | 192.70 | OK | |||
| r-release-linux-x86_64 | 1.4 | 30.60 | 98.47 | 129.07 | OK | |
| r-release-osx-x86_64 | 1.4 | ERROR | ||||
| r-release-windows-ix86+x86_64 | 1.4 | 66.00 | 120.00 | 186.00 | OK | |
| r-oldrel-osx-x86_64 | 1.4 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 1.4 | 76.00 | 167.00 | 243.00 | OK |
Version: 1.4
Check: examples
Result: ERROR
Running examples in ‘bvpSolve-Ex.R’ failed
The error most likely occurred in:
> ### Name: bvpcol
> ### Title: Solves multipoint boundary value problems of ordinary
> ### differential equations or differential algebraic equations, using a
> ### collocation method.
> ### Aliases: bvpcol
> ### Keywords: math
>
> ### ** Examples
>
> ## =============================================================================
> ## Example 1: simple standard problem
> ## solve the BVP ODE:
> ## d2y/dt^2=-3py/(p+t^2)^2
> ## y(t= -0.1)=-0.1/sqrt(p+0.01)
> ## y(t= 0.1)= 0.1/sqrt(p+0.01)
> ## where p = 1e-5
> ##
> ## analytical solution y(t) = t/sqrt(p + t^2).
> ##
> ## The problem is rewritten as a system of 2 ODEs:
> ## dy=y2
> ## dy2=-3p*y/(p+t^2)^2
> ## =============================================================================
>
> #--------------------------------
> # Derivative function
> #--------------------------------
> fun <- function(t, y, pars) {
+ dy1 <- y[2]
+ dy2 <- - 3 * p * y[1] / (p+t*t)^2
+ return(list(c(dy1,
+ dy2))) }
>
> # parameter value
> p <- 1e-5
>
> # initial and final condition; second conditions unknown
> init <- c(-0.1 / sqrt(p+0.01), NA)
> end <- c( 0.1 / sqrt(p+0.01), NA)
>
> # Solve bvp
> sol <- bvpcol(yini = init, yend = end,
+ x = seq(-0.1, 0.1, by = 0.001), func = fun)
*** caught segfault ***
address 0x0, cause 'memory not mapped'
Traceback:
1: bvpsolver(2, yini, x, func, yend, parms, order, ynames, xguess, yguess, jacfunc, bound, jacbound, leftbc, posbound, islin, nmax, ncomp, atol, dllname, initfunc, rpar, ipar, nout, outnames, forcings, initforc, fcontrol, verbose, cond = FALSE, lobatto = FALSE, allpoints = TRUE, colp = colp, fullOut = fullOut, bspline = bspline, eps = NULL, epsini = NULL, dae = dae, ...)
2: bvpcol(yini = init, yend = end, x = seq(-0.1, 0.1, by = 0.001), func = fun)
An irrecoverable exception occurred. R is aborting now ...
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 1.4
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘bvpSolve.Rnw’
...
7: withVisible(eval(ei, envir))
8: source(output, echo = TRUE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch({ source(output, echo = TRUE)}, error = function(e) { cat("\n When sourcing ", sQuote(output), ":\n", sep = "") stop(conditionMessage(e), call. = FALSE, domain = NA)})
13: tools:::.run_one_vignette("bvpSolve.Rnw", "/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/bvpSolve.Rcheck/00_pkg_src/bvpSolve/vignettes", encoding = "latin1", pkgdir = "/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/bvpSolve.Rcheck/00_pkg_src/bvpSolve")
An irrecoverable exception occurred. R is aborting now ...
... incomplete output. Crash?
when running code in ‘bvpTests.Rnw’
...
7: withVisible(eval(ei, envir))
8: source(output, echo = TRUE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch({ source(output, echo = TRUE)}, error = function(e) { cat("\n When sourcing ", sQuote(output), ":\n", sep = "") stop(conditionMessage(e), call. = FALSE, domain = NA)})
13: tools:::.run_one_vignette("bvpTests.Rnw", "/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/bvpSolve.Rcheck/00_pkg_src/bvpSolve/vignettes", encoding = "latin1", pkgdir = "/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/bvpSolve.Rcheck/00_pkg_src/bvpSolve")
An irrecoverable exception occurred. R is aborting now ...
... incomplete output. Crash?
‘bvpSolve.Rnw’ using ‘latin1’... failed to complete the test
‘bvpTests.Rnw’ using ‘latin1’... failed to complete the test
Flavor: r-release-osx-x86_64
Version: 1.4
Check: re-building of vignette outputs
Result: NOTE
Error(s) in re-building vignettes:
sh: line 1: 92628 Segmentation fault: 11 '/Library/Frameworks/R.framework/Resources/bin/R' --vanilla --no-echo > '/Volumes/Temp/tmp/RtmpMS9s76/file168f96f89d57e' 2>&1 < '/Volumes/Temp/tmp/RtmpMS9s76/file168f9421f7c67'
--- re-building ‘bvpSolve.Rnw’ using Sweave
Loading required package: deSolve
Attaching package: ‘bvpSolve’
The following object is masked from ‘package:stats’:
approx
*** caught segfault ***
address 0x0, cause 'memory not mapped'
Traceback:
1: bvpsolver(1, yini, x, func, yend, parms, order, ynames, xguess, yguess, jacfunc, bound, jacbound, leftbc, posbound, islin, nmax, ncomp, atol, dllname, initfunc, rpar, ipar, nout, outnames, forcings, initforc, fcontrol, verbose, cond, lobatto, allpoints, colp = NULL, fullOut = TRUE, bspline = TRUE, eps = NULL, epsini = NULL, dae = NULL, ...)
2: bvptwp(yini = c(-1, NA), yend = c(1, NA), x = x, func = fun)
3: system.time(sol2 <- bvptwp(yini = c(-1, NA), yend = c(1, NA), x = x, func = fun))
4: print(system.time(sol2 <- bvptwp(yini = c(-1, NA), yend = c(1, NA), x = x, func = fun)))
5: eval(expr, .GlobalEnv)
6: eval(expr, .GlobalEnv)
7: withVisible(eval(expr, .GlobalEnv))
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call)[1L] prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(withVisible(eval(expr, .GlobalEnv)), silent = TRUE)
13: evalFunc(ce, options)
14: tryCatchList(expr, classes, parentenv, handlers)
15: tryCatch(evalFunc(ce, options), finally = { cat("\n") sink()})
16: driver$runcode(drobj, chunk, chunkopts)
17: utils::Sweave(...)
18: engine$weave(file, quiet = quiet, encoding = enc)
19: doTryCatch(return(expr), name, parentenv, handler)
20: tryCatchOne(expr, names, parentenv, handlers[[1L]])
21: tryCatchList(expr, classes, parentenv, handlers)
22: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))})
23: tools:::.buildOneVignette("bvpSolve.Rnw", "/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/bvpSolve.Rcheck/vign_test/bvpSolve", TRUE, FALSE, "bvpSolve", "latin1", "/Volumes/Temp/tmp/RtmpMS9s76/file168f97a53635.rds")
An irrecoverable exception occurred. R is aborting now ...
sh: line 1: 92900 Segmentation fault: 11 '/Library/Frameworks/R.framework/Resources/bin/R' --vanilla --no-echo > '/Volumes/Temp/tmp/RtmpMS9s76/file168f958a00d9a' 2>&1 < '/Volumes/Temp/tmp/RtmpMS9s76/file168f973dd26ea'
--- re-building ‘bvpTests.Rnw’ using Sweave
Loading required package: deSolve
Attaching package: ‘bvpSolve’
The following object is masked from ‘package:stats’:
approx
*** caught segfault ***
address 0x0, cause 'memory not mapped'
Traceback:
1: bvpsolver(1, yini, x, func, yend, parms, order, ynames, xguess, yguess, jacfunc, bound, jacbound, leftbc, posbound, islin, nmax, ncomp, atol, dllname, initfunc, rpar, ipar, nout, outnames, forcings, initforc, fcontrol, verbose, cond, lobatto, allpoints, colp = NULL, fullOut = TRUE, bspline = TRUE, eps = NULL, epsini = NULL, dae = NULL, ...)
2: bvptwp(yini = c(1, NA), yend = c(0, NA), x = seq(0, 1, by = 0.01), func = Prob1)
3: system.time(mod1 <- bvptwp(yini = c(1, NA), yend = c(0, NA), x = seq(0, 1, by = 0.01), func = Prob1))
4: print(system.time(mod1 <- bvptwp(yini = c(1, NA), yend = c(0, NA), x = seq(0, 1, by = 0.01), func = Prob1)))
5: eval(expr, .GlobalEnv)
6: eval(expr, .GlobalEnv)
7: withVisible(eval(expr, .GlobalEnv))
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call)[1L] prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(withVisible(eval(expr, .GlobalEnv)), silent = TRUE)
13: evalFunc(ce, options)
14: tryCatchList(expr, classes, parentenv, handlers)
15: tryCatch(evalFunc(ce, options), finally = { cat("\n") sink()})
16: driver$runcode(drobj, chunk, chunkopts)
17: utils::Sweave(...)
18: engine$weave(file, quiet = quiet, encoding = enc)
19: doTryCatch(return(expr), name, parentenv, handler)
20: tryCatchOne(expr, names, parentenv, handlers[[1L]])
21: tryCatchList(expr, classes, parentenv, handlers)
22: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))})
23: tools:::.buildOneVignette("bvpTests.Rnw", "/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/bvpSolve.Rcheck/vign_test/bvpSolve", TRUE, FALSE, "bvpTests", "latin1", "/Volumes/Temp/tmp/RtmpMS9s76/file168f92120701b.rds")
An irrecoverable exception occurred. R is aborting now ...
SUMMARY: processing the following files failed:
‘bvpSolve.Rnw’ ‘bvpTests.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-osx-x86_64
Version: 1.4
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘bvpSolve.Rnw’
...
7: withVisible(eval(ei, envir))
8: source(output, echo = TRUE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch({ source(output, echo = TRUE)}, error = function(e) { cat("\n When sourcing ", sQuote(output), ":\n", sep = "") stop(conditionMessage(e), call. = FALSE, domain = NA)})
13: tools:::.run_one_vignette("bvpSolve.Rnw", "/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/bvpSolve.Rcheck/00_pkg_src/bvpSolve/vignettes", encoding = "latin1", pkgdir = "/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/bvpSolve.Rcheck/00_pkg_src/bvpSolve")
An irrecoverable exception occurred. R is aborting now ...
... incomplete output. Crash?
when running code in ‘bvpTests.Rnw’
...
7: withVisible(eval(ei, envir))
8: source(output, echo = TRUE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch({ source(output, echo = TRUE)}, error = function(e) { cat("\n When sourcing ", sQuote(output), ":\n", sep = "") stop(conditionMessage(e), call. = FALSE, domain = NA)})
13: tools:::.run_one_vignette("bvpTests.Rnw", "/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/bvpSolve.Rcheck/00_pkg_src/bvpSolve/vignettes", encoding = "latin1", pkgdir = "/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/bvpSolve.Rcheck/00_pkg_src/bvpSolve")
An irrecoverable exception occurred. R is aborting now ...
... incomplete output. Crash?
‘bvpSolve.Rnw’using ‘latin1’... failed to complete the test
‘bvpTests.Rnw’using ‘latin1’... failed to complete the test
Flavor: r-oldrel-osx-x86_64
Version: 1.4
Check: re-building of vignette outputs
Result: NOTE
Error(s) in re-building vignettes:
sh: line 1: 98295 Segmentation fault: 11 '/Library/Frameworks/R.framework/Resources/bin/R' --vanilla --slave > '/tmp/Rtmp24zWqe/file17ff27f689a4f' 2>&1 < '/tmp/Rtmp24zWqe/file17ff22c6af9e2'
--- re-building ‘bvpSolve.Rnw’ using Sweave
Loading required package: deSolve
Attaching package: ‘bvpSolve’
The following object is masked from ‘package:stats’:
approx
*** caught segfault ***
address 0x0, cause 'memory not mapped'
Traceback:
1: bvpsolver(1, yini, x, func, yend, parms, order, ynames, xguess, yguess, jacfunc, bound, jacbound, leftbc, posbound, islin, nmax, ncomp, atol, dllname, initfunc, rpar, ipar, nout, outnames, forcings, initforc, fcontrol, verbose, cond, lobatto, allpoints, colp = NULL, fullOut = TRUE, bspline = TRUE, eps = NULL, epsini = NULL, dae = NULL, ...)
2: bvptwp(yini = c(-1, NA), yend = c(1, NA), x = x, func = fun)
3: system.time(sol2 <- bvptwp(yini = c(-1, NA), yend = c(1, NA), x = x, func = fun))
4: print(system.time(sol2 <- bvptwp(yini = c(-1, NA), yend = c(1, NA), x = x, func = fun)))
5: eval(expr, .GlobalEnv)
6: eval(expr, .GlobalEnv)
7: withVisible(eval(expr, .GlobalEnv))
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call)[1L] prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(withVisible(eval(expr, .GlobalEnv)), silent = TRUE)
13: evalFunc(ce, options)
14: tryCatchList(expr, classes, parentenv, handlers)
15: tryCatch(evalFunc(ce, options), finally = { cat("\n") sink()})
16: driver$runcode(drobj, chunk, chunkopts)
17: utils::Sweave(...)
18: engine$weave(file, quiet = quiet, encoding = enc)
19: doTryCatch(return(expr), name, parentenv, handler)
20: tryCatchOne(expr, names, parentenv, handlers[[1L]])
21: tryCatchList(expr, classes, parentenv, handlers)
22: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))})
23: tools:::.buildOneVignette("bvpSolve.Rnw", "/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/bvpSolve.Rcheck/vign_test/bvpSolve", TRUE, FALSE, "bvpSolve", "latin1", "/tmp/Rtmp24zWqe/file17ff217efc8cf.rds")
An irrecoverable exception occurred. R is aborting now ...
sh: line 1: 98301 Segmentation fault: 11 '/Library/Frameworks/R.framework/Resources/bin/R' --vanilla --slave > '/tmp/Rtmp24zWqe/file17ff21616284c' 2>&1 < '/tmp/Rtmp24zWqe/file17ff28afa0e8'
--- re-building ‘bvpTests.Rnw’ using Sweave
Loading required package: deSolve
Attaching package: ‘bvpSolve’
The following object is masked from ‘package:stats’:
approx
*** caught segfault ***
address 0x0, cause 'memory not mapped'
Traceback:
1: bvpsolver(1, yini, x, func, yend, parms, order, ynames, xguess, yguess, jacfunc, bound, jacbound, leftbc, posbound, islin, nmax, ncomp, atol, dllname, initfunc, rpar, ipar, nout, outnames, forcings, initforc, fcontrol, verbose, cond, lobatto, allpoints, colp = NULL, fullOut = TRUE, bspline = TRUE, eps = NULL, epsini = NULL, dae = NULL, ...)
2: bvptwp(yini = c(1, NA), yend = c(0, NA), x = seq(0, 1, by = 0.01), func = Prob1)
3: system.time(mod1 <- bvptwp(yini = c(1, NA), yend = c(0, NA), x = seq(0, 1, by = 0.01), func = Prob1))
4: print(system.time(mod1 <- bvptwp(yini = c(1, NA), yend = c(0, NA), x = seq(0, 1, by = 0.01), func = Prob1)))
5: eval(expr, .GlobalEnv)
6: eval(expr, .GlobalEnv)
7: withVisible(eval(expr, .GlobalEnv))
8: doTryCatch(return(expr), name, parentenv, handler)
9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call)[1L] prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
12: try(withVisible(eval(expr, .GlobalEnv)), silent = TRUE)
13: evalFunc(ce, options)
14: tryCatchList(expr, classes, parentenv, handlers)
15: tryCatch(evalFunc(ce, options), finally = { cat("\n") sink()})
16: driver$runcode(drobj, chunk, chunkopts)
17: utils::Sweave(...)
18: engine$weave(file, quiet = quiet, encoding = enc)
19: doTryCatch(return(expr), name, parentenv, handler)
20: tryCatchOne(expr, names, parentenv, handlers[[1L]])
21: tryCatchList(expr, classes, parentenv, handlers)
22: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))})
23: tools:::.buildOneVignette("bvpTests.Rnw", "/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.6/bvpSolve.Rcheck/vign_test/bvpSolve", TRUE, FALSE, "bvpTests", "latin1", "/tmp/Rtmp24zWqe/file17ff2233b7b36.rds")
An irrecoverable exception occurred. R is aborting now ...
SUMMARY: processing the following files failed:
‘bvpSolve.Rnw’ ‘bvpTests.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-osx-x86_64