CRAN Package Check Results for Package dimRed

Last updated on 2020-07-02 02:09:47 CEST.

Check Details

Version: 0.2.3
Check: Rd cross-references
Result: NOTE
    Undeclared package ‘CVST’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.2.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'dimensionality-reduction.Rnw' using knitr
    --- finished re-building 'dimensionality-reduction.Rnw'
    
    make[1]: Entering directory '/d/RCompile/CRANpkg/local/4.1/dimRed.Rcheck/vign_test/dimRed/vignettes'
    echo "BNET_BUILD_VIGNETTE: "
    BNET_BUILD_VIGNETTE:
    D:/RCompile/recent/R/bin/Rscript -e "knitr::knit2pdf('dimensionality-reduction.Rnw')"
    
    
    processing file: dimensionality-reduction.Rnw
     ordinary text without R code
    
    label: pca_isomap_example (with options)
    List of 3
     $ include : logi FALSE
     $ fig.width : num 4
     $ fig.height: num 4
    
     ordinary text without R code
    
    label: unnamed-chunk-1 (with options)
    List of 1
     $ eval: logi FALSE
    
     ordinary text without R code
    
    label: unnamed-chunk-2 (with options)
    List of 1
     $ include: logi FALSE
    
     ordinary text without R code
    
    label: select_k (with options)
    List of 3
     $ include : logi FALSE
     $ fig.width : num 11
     $ fig.height: num 5
    
     ordinary text without R code
    
    label: knngraphs (with options)
    List of 3
     $ include : logi FALSE
     $ fig.width : num 8
     $ fig.height: num 3
    
     ordinary text without R code
    
    label: unnamed-chunk-3 (with options)
    List of 1
     $ eval: logi FALSE
    
     ordinary text without R code
    
    label: plot_quality (with options)
    List of 1
     $ include: logi FALSE
    
     ordinary text without R code
    
    label: unnamed-chunk-4 (with options)
    List of 1
     $ eval: logi FALSE
    
     ordinary text without R code
    
    output file: dimensionality-reduction.tex
    
    [1] "dimensionality-reduction.pdf"
    Warning message:
    LaTeX Warning: `h' float specifier changed to `ht'.
    LaTeX Warning: `h' float specifier changed to `ht'.
    Package xcolor Warning: Incompatible color definition on input line 1098.
    Package xcolor Warning: Incompatible color definition on input line 1179.
    Package xcolor Warning: Incompatible color definition on input line 1232.
    D:/RCompile/recent/R/bin/Rscript -e "tools::compactPDF('dimensionality-reduction.pdf', gs_quality = 'ebook')"
    sh: D:/RCompile/recent/R/bin/Rscript: No such file or directory
    make[1]: *** [Makefile:4: all] Error 127
    make[1]: Leaving directory '/d/RCompile/CRANpkg/local/4.1/dimRed.Rcheck/vign_test/dimRed/vignettes'
    Error in tools:::buildVignettes(dir = "d:/Rcompile/CRANpkg/local/4.1/dimRed.Rcheck/vign_test/dimRed", :
     running 'make' failed
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 0.2.3
Check: PDF version of manual
Result: WARN
    LaTeX errors when creating PDF version.
    This typically indicates Rd problems.
Flavor: r-devel-windows-ix86+x86_64

Version: 0.2.3
Check: PDF version of manual without hyperrefs or index
Result: ERROR
    Re-running with no redirection of stdout/stderr.
Flavor: r-devel-windows-ix86+x86_64

Version: 0.2.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘dimensionality-reduction.Rnw’ using knitr
    --- finished re-building ‘dimensionality-reduction.Rnw’
    
    echo "BNET_BUILD_VIGNETTE: "
    BNET_BUILD_VIGNETTE:
    /home/ripley/R/cc/bin/Rscript -e "knitr::knit2pdf('dimensionality-reduction.Rnw')"
    
    
    processing file: dimensionality-reduction.Rnw
     ordinary text without R code
    
    label: pca_isomap_example (with options)
    List of 3
     $ include : logi FALSE
     $ fig.width : num 4
     $ fig.height: num 4
    
     ordinary text without R code
    
    label: unnamed-chunk-1 (with options)
    List of 1
     $ eval: logi FALSE
    
     ordinary text without R code
    
    label: unnamed-chunk-2 (with options)
    List of 1
     $ include: logi FALSE
    
     ordinary text without R code
    
    label: select_k (with options)
    List of 3
     $ include : logi FALSE
     $ fig.width : num 11
     $ fig.height: num 5
    
     ordinary text without R code
    
    label: knngraphs (with options)
    List of 3
     $ include : logi FALSE
     $ fig.width : num 8
     $ fig.height: num 3
    
     ordinary text without R code
    
    label: unnamed-chunk-3 (with options)
    List of 1
     $ eval: logi FALSE
    
     ordinary text without R code
    
    label: plot_quality (with options)
    List of 1
     $ include: logi FALSE
    
     ordinary text without R code
    
    label: unnamed-chunk-4 (with options)
    List of 1
     $ eval: logi FALSE
    
     ordinary text without R code
    
    output file: dimensionality-reduction.tex
    
    Error in switch(os_index, win_app_dir("TinyTeX"), "~/.TinyTeX", "~/Library/TinyTeX") :
     EXPR must be a length 1 vector
    Calls: <Anonymous> ... file.path -> list.files -> file.path -> default_inst
    Execution halted
    *** Error code 1
    make: Fatal error: Command failed for target `all'
    Current working directory /home/ripley/R/packages/tests32/dimRed.Rcheck/vign_test/dimRed/vignettes
    Error in tools:::buildVignettes(dir = "/home/ripley/R/packages/tests32/dimRed.Rcheck/vign_test/dimRed", :
     running 'make' failed
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.2.3
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘pcaL1’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64