CRAN Package Check Results for Package spdep

Last updated on 2020-07-02 02:10:02 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1-5 45.15 312.99 358.14 OK
r-devel-linux-x86_64-debian-gcc 1.1-5 37.02 232.79 269.81 OK
r-devel-linux-x86_64-fedora-clang 1.1-5 436.46 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1-5 432.83 OK
r-devel-windows-ix86+x86_64 1.1-5 37.00 9.00 46.00 ERROR
r-patched-linux-x86_64 1.1-5 42.19 306.56 348.75 OK
r-patched-solaris-x86 1.1-5 538.90 NOTE
r-release-linux-x86_64 1.1-3 40.00 302.97 342.97 WARN
r-release-osx-x86_64 1.1-3 OK
r-release-windows-ix86+x86_64 1.1-3 76.00 385.00 461.00 WARN
r-oldrel-osx-x86_64 1.1-5 NOTE
r-oldrel-windows-ix86+x86_64 1.1-5 94.00 633.00 727.00 NOTE

Check Details

Version: 1.1-5
Check: installed package size
Result: NOTE
     installed size is 7.5Mb
     sub-directories of 1Mb or more:
     R 1.2Mb
     doc 5.1Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-patched-solaris-x86, r-oldrel-osx-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1-5
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-devel-windows-ix86+x86_64

Version: 1.1-3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘CO69.Rmd’ using knitr
    Loading required package: sp
    Loading required package: spData
    To access larger datasets in this package, install the spDataLarge
    package with: `install.packages('spDataLarge',
    repos='https://nowosad.github.io/drat/', type='source')`
    Loading required package: sf
    Linking to GEOS 3.8.1, GDAL 3.1.0, PROJ 7.0.1
    rgdal: version: 1.5-12, (SVN revision 1018)
    Geospatial Data Abstraction Library extensions to R successfully loaded
    Loaded GDAL runtime: GDAL 3.1.0, released 2020/05/03
    Path to GDAL shared files: /usr/share/gdal
    GDAL binary built with GEOS: TRUE
    Loaded PROJ runtime: Rel. 7.0.1, May 1st, 2020, [PJ_VERSION: 701]
    Path to PROJ shared files: /home/hornik/.local/share/proj:/usr/share/proj
    PROJ CDN enabled:FALSE
    Linking to sp version:1.4-2
    To mute warnings of possible GDAL/OSR exportToProj4() degradation,
    use options("rgdal_show_exportToProj4_warnings"="none") before loading rgdal.
    Warning in showSRID(uprojargs, format = "PROJ", multiline = "NO") :
     Discarded datum Unknown based on Airy 1830 ellipsoid in CRS definition
    Checking rgeos availability: TRUE
    Warning in diffnb(nb, lw_unstand$neighbours, verbose = TRUE) :
     region.id differ; using ids of first list
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    --- finished re-building ‘CO69.Rmd’
    
    --- re-building ‘nb_igraph.Rmd’ using knitr
    --- finished re-building ‘nb_igraph.Rmd’
    
    --- re-building ‘nb_sf.Rmd’ using knitr
    --- finished re-building ‘nb_sf.Rmd’
    
    --- re-building ‘sids.Rmd’ using knitr
    Loading required package: sp
    Loading required package: spData
    To access larger datasets in this package, install the spDataLarge
    package with: `install.packages('spDataLarge',
    repos='https://nowosad.github.io/drat/', type='source')`
    Loading required package: sf
    Linking to GEOS 3.8.1, GDAL 3.1.0, PROJ 7.0.1
    Warning in st_centroid.sfc(st_geometry(nc), of_largest_polygon = TRUE) :
     st_centroid does not give correct centroids for longitude/latitude data
    Warning in download.file("https://s3.amazonaws.com/geoda/data/sids.zip", :
     cannot open URL 'https://s3.amazonaws.com/geoda/data/sids.zip': HTTP status was '404 Not Found'
    Quitting from lines 104-111 (sids.Rmd)
    Error: processing vignette 'sids.Rmd' failed with diagnostics:
    cannot open URL ‘https://s3.amazonaws.com/geoda/data/sids.zip’
    --- failed re-building ‘sids.Rmd’
    
    --- re-building ‘nb.Rnw’ using Sweave
    rgdal: version: 1.5-12, (SVN revision 1018)
    Geospatial Data Abstraction Library extensions to R successfully loaded
    Loaded GDAL runtime: GDAL 3.1.0, released 2020/05/03
    Path to GDAL shared files: /usr/share/gdal
    GDAL binary built with GEOS: TRUE
    Loaded PROJ runtime: Rel. 7.0.1, May 1st, 2020, [PJ_VERSION: 701]
    Path to PROJ shared files: /home/hornik/.local/share/proj:/usr/share/proj
    PROJ CDN enabled:FALSE
    Linking to sp version:1.4-2
    To mute warnings of possible GDAL/OSR exportToProj4() degradation,
    use options("rgdal_show_exportToProj4_warnings"="none") before loading rgdal.
    Loading required package: spData
    To access larger datasets in this package, install the spDataLarge package with:
    `install.packages('spDataLarge', repos='https://nowosad.github.io/drat/',
    type='source')`
    Loading required package: sf
    Linking to GEOS 3.8.1, GDAL 3.1.0, PROJ 7.0.1
    
     PLEASE NOTE: The components "delsgs" and "summary" of the
     object returned by deldir() are now DATA FRAMES rather than
     matrices (as they were prior to release 0.0-18).
     See help("deldir").
    
     PLEASE NOTE: The process that deldir() uses for determining
     duplicated points has changed from that used in version
     0.0-9 of this package (and previously). See help("deldir").
    
    
    rgeos version: 0.5-3, (SVN revision 634)
     GEOS runtime version: 3.8.1-CAPI-1.13.3
     Linking to sp version: 1.4-2
     Polygon checking: TRUE
    
    --- finished re-building ‘nb.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘sids.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-linux-x86_64

Version: 1.1-3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'CO69.Rmd' using knitr
    Loading required package: sp
    Loading required package: spData
    To access larger datasets in this package, install the spDataLarge
    package with: `install.packages('spDataLarge',
    repos='https://nowosad.github.io/drat/', type='source')`
    Loading required package: sf
    Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
    rgdal: version: 1.5-12, (SVN revision 1018)
    Geospatial Data Abstraction Library extensions to R successfully loaded
    Loaded GDAL runtime: GDAL 3.0.4, released 2020/01/28
    Path to GDAL shared files: D:/temp/Rtmp00XMYc/RLIBS_cd8071a764c/rgdal/gdal
    GDAL binary built with GEOS: TRUE
    Loaded PROJ runtime: Rel. 6.3.1, February 10th, 2020, [PJ_VERSION: 631]
    Path to PROJ shared files: D:/temp/Rtmp00XMYc/RLIBS_cd8071a764c/rgdal/proj
    Linking to sp version:1.4-2
    To mute warnings of possible GDAL/OSR exportToProj4() degradation,
    use options("rgdal_show_exportToProj4_warnings"="none") before loading rgdal.
    Warning in showSRID(uprojargs, format = "PROJ", multiline = "NO") :
     Discarded datum Unknown based on Airy 1830 ellipsoid in CRS definition
    Checking rgeos availability: TRUE
    Warning in diffnb(nb, lw_unstand$neighbours, verbose = TRUE) :
     region.id differ; using ids of first list
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    Warning in nb2listw(nb, glist = glist, style = "B") :
     zero sum general weights
    --- finished re-building 'CO69.Rmd'
    
    --- re-building 'nb_igraph.Rmd' using knitr
    --- finished re-building 'nb_igraph.Rmd'
    
    --- re-building 'nb_sf.Rmd' using knitr
    --- finished re-building 'nb_sf.Rmd'
    
    --- re-building 'sids.Rmd' using knitr
    Loading required package: sp
    Loading required package: spData
    To access larger datasets in this package, install the spDataLarge
    package with: `install.packages('spDataLarge',
    repos='https://nowosad.github.io/drat/', type='source')`
    Loading required package: sf
    Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
    Warning in st_centroid.sfc(st_geometry(nc), of_largest_polygon = TRUE) :
     st_centroid does not give correct centroids for longitude/latitude data
    Warning in download.file("https://s3.amazonaws.com/geoda/data/sids.zip", :
     cannot open URL 'https://s3.amazonaws.com/geoda/data/sids.zip': HTTP status was '404 Not Found'
    Quitting from lines 104-111 (sids.Rmd)
    Error: processing vignette 'sids.Rmd' failed with diagnostics:
    cannot open URL 'https://s3.amazonaws.com/geoda/data/sids.zip'
    --- failed re-building 'sids.Rmd'
    
    --- re-building 'nb.Rnw' using Sweave
    rgdal: version: 1.5-12, (SVN revision 1018)
    Geospatial Data Abstraction Library extensions to R successfully loaded
    Loaded GDAL runtime: GDAL 3.0.4, released 2020/01/28
    Path to GDAL shared files: D:/temp/Rtmp00XMYc/RLIBS_cd8071a764c/rgdal/gdal
    GDAL binary built with GEOS: TRUE
    Loaded PROJ runtime: Rel. 6.3.1, February 10th, 2020, [PJ_VERSION: 631]
    Path to PROJ shared files: D:/temp/Rtmp00XMYc/RLIBS_cd8071a764c/rgdal/proj
    Linking to sp version:1.4-2
    To mute warnings of possible GDAL/OSR exportToProj4() degradation,
    use options("rgdal_show_exportToProj4_warnings"="none") before loading rgdal.
    Loading required package: spData
    To access larger datasets in this package, install the spDataLarge package with:
    `install.packages('spDataLarge', repos='https://nowosad.github.io/drat/',
    type='source')`
    Loading required package: sf
    Linking to GEOS 3.8.0, GDAL 3.0.4, PROJ 6.3.1
    
     PLEASE NOTE: The components "delsgs" and "summary" of the
     object returned by deldir() are now DATA FRAMES rather than
     matrices (as they were prior to release 0.0-18).
     See help("deldir").
    
     PLEASE NOTE: The process that deldir() uses for determining
     duplicated points has changed from that used in version
     0.0-9 of this package (and previously). See help("deldir").
    
    
    rgeos version: 0.5-3, (SVN revision 634)
     GEOS runtime version: 3.8.0-CAPI-1.13.1
     Linking to sp version: 1.4-2
     Polygon checking: TRUE
    
    --- finished re-building 'nb.Rnw'
    
    SUMMARY: processing the following file failed:
     'sids.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-windows-ix86+x86_64