Enhancements
- Added variable importance tests via interface with the vip package
- Added clamping for the predict functions, including plots of where clamping is happening
- Added clamping for model construction functions, with a TRUE/FALSE switch defaulting to TRUE
- Changed naming conventions for predict functions so that the suitability raster is in the $suitability slot, just as with modeling functions
- Added progress bars for a lot of tests
- Added “verbose” option for a lot of functions, defaulting to FALSE
Bug fixes
- Added some code to fix a bug with recalibration. Basically CalibratR’s call to parallel was tanking on Mac OS, and there’s just a little code snippet that needed to be added to the call to make that work.
- Fixed interactive.plot generic and moved the function to its own file to make it easier to extend
- Temporarily suppressing some warnings coming out of leaflet that are being produced by the recent rgdal changes
- Fixed background sampling code to resample when necessary
- Changed enmtools.ranger demo code to actually use ranger instead of rf
- Fixed code for calculating p values for some of the hypothesis tests, the old code was getting wrong answers when there were repeated values