incidence2: Compute, Handle and Plot Incidence of Dated Events

Provides functions and classes to compute, handle and visualise incidence from dated events for a defined time interval. Dates can be provided in various standard formats. The class 'incidence2' is used to store computed incidence and can be easily manipulated, subsetted, and plotted. This package is part of the RECON (<>) toolkit for outbreak analysis.

Version: 0.2.0
Imports: ggplot2, aweek (≥ 0.2.0), rlang, dplyr (≥ 1.0.0), tibble, ellipsis, vctrs, magrittr, pillar, data.table
Suggests: outbreaks, testthat, knitr, rmarkdown, covr
Published: 2020-09-22
Author: Tim Taylor ORCID iD [aut, cre], Thibaut Jombart [aut], Zhian N. Kamvar ORCID iD [aut], Rich FitzJohn [aut], Jun Cai ORCID iD [ctb], Sangeeta Bhatia [ctb], Jakob Schumacher [ctb], Juliet R.C. Pulliam ORCID iD [ctb]
Maintainer: Tim Taylor <tim.taylor at>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: NEWS
CRAN checks: incidence2 results


Reference manual: incidence2.pdf
Vignettes: Introduction to the incidence package
Customizing incidence plots
Handling incidence objects
Package source: incidence2_0.2.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel: not available
macOS binaries: r-release: incidence2_0.2.0.tgz, r-oldrel: not available
Old sources: incidence2 archive


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