mixIndependR: Genetics and Independence Testing of Mixed Genetic Panels

Developed to deal with multi-locus genotype data, this package is especially designed for those panel which include different type of markers. Basic genetic parameters like allele frequency, genotype frequency, heterozygosity and Hardy-Weinberg test of mixed genetic data can be obtained. In addition, a new test for mutual independence which is compatible for mixed genetic data is developed in this package.

Version: 0.3.0
Depends: R (≥ 3.6.0)
Imports: stats (≥ 3.3), utils (≥ 3.2.3), stringr, ggplot2
Suggests: testthat, knitr, rmarkdown
Published: 2020-10-07
Author: Bing Song
Maintainer: Bing Song <bingsong at my.unthsc.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Materials: README NEWS
CRAN checks: mixIndependR results


Reference manual: mixIndependR.pdf
Vignettes: Basic Genetics
Distribution Building and Comparison
Hypothesis Test
Package source: mixIndependR_0.3.0.tar.gz
Windows binaries: r-devel: mixIndependR_0.3.0.zip, r-release: mixIndependR_0.3.0.zip, r-oldrel: mixIndependR_0.2.1.zip
macOS binaries: r-release: mixIndependR_0.3.0.tgz, r-oldrel: mixIndependR_0.3.0.tgz
Old sources: mixIndependR archive


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