Originally designed application in the context of resource-limited plant research and breeding programs, 'waves' provides an open-source solution to spectral data processing and model development by bringing useful packages together into a streamlined pipeline. This package is wrapper for functions related to the analysis of point visible and near-infrared reflectance measurements. It includes visualization, filtering, aggregation, preprocessing, cross-validation set formation, model training, and prediction functions to enable open-source association of spectral and reference data. Specialized cross-validation schemes are described in detail in Jarquín et al. (2017) <doi:10.3835/plantgenome2016.12.0130>. Example data is from Ikeogu et al. (2017) <doi:10.1371/journal.pone.0188918>.
Version: | 0.1.0 |
Depends: | R (≥ 3.5) |
Imports: | dplyr, prospectr, spectacles, caret, pls, randomForest, wesanderson, magrittr, tidyselect, ggplot2, tidyr (≥ 1.0), stringr, rlang |
Suggests: | testthat (≥ 2.1.0) |
Published: | 2020-09-17 |
Author: | Jenna Hershberger |
Maintainer: | Jenna Hershberger <jmh579 at cornell.edu> |
BugReports: | https://github.com/GoreLab/waves/issues |
License: | MIT + file LICENSE |
URL: | https://github.com/GoreLab/waves |
NeedsCompilation: | no |
Citation: | waves citation info |
Materials: | README NEWS |
CRAN checks: | waves results |
Reference manual: | waves.pdf |
Package source: | waves_0.1.0.tar.gz |
Windows binaries: | r-devel: waves_0.1.0.zip, r-release: waves_0.1.0.zip, r-oldrel: waves_0.1.0.zip |
macOS binaries: | r-release: waves_0.1.0.tgz, r-oldrel: waves_0.1.0.tgz |
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