CRAN Package Check Results for Package ecospat

Last updated on 2020-12-01 00:46:40 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.1 45.59 316.33 361.92 ERROR
r-devel-linux-x86_64-debian-gcc 3.1 29.25 234.90 264.15 ERROR
r-devel-linux-x86_64-fedora-clang 3.1 439.10 ERROR
r-devel-linux-x86_64-fedora-gcc 3.1 412.34 ERROR
r-devel-windows-ix86+x86_64 3.1 83.00 385.00 468.00 ERROR
r-patched-linux-x86_64 3.1 32.93 323.96 356.89 OK
r-patched-solaris-x86 3.1 628.90 NOTE
r-release-linux-x86_64 3.1 34.39 323.76 358.15 OK
r-release-macos-x86_64 3.1 NOTE
r-release-windows-ix86+x86_64 3.1 64.00 330.00 394.00 OK
r-oldrel-macos-x86_64 3.1 NOTE
r-oldrel-windows-ix86+x86_64 3.1 73.00 410.00 483.00 OK

Check Details

Version: 3.1
Check: examples
Result: ERROR
    Running examples in 'ecospat-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: ecospat.SESAM.prr
    > ### Title: SESAM Probability Ranking Rule
    > ### Aliases: ecospat.SESAM.prr
    >
    > ### ** Examples
    >
    > proba <- ecospat.testData[,73:92]
    > sr <- as.data.frame(rowSums(proba))
    > ppr<-ecospat.SESAM.prr(proba, sr)
    Error in `[<-.data.frame`(`*tmp*`, , pres, value = 1) :
     missing values are not allowed in subscripted assignments of data frames
    Calls: ecospat.SESAM.prr -> [<- -> [<-.data.frame
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 3.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'vignette_ecospat_package.Rmd' using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     The vignette engine knitr::rmarkdown is not available because the rmarkdown package is not available. Did you forget to add it to Suggests in DESCRIPTION? Please see https://github.com/yihui/knitr/issues/1864 for more information.
    Quitting from lines 463-465 (vignette_ecospat_package.Rmd)
    Error: processing vignette 'vignette_ecospat_package.Rmd' failed with diagnostics:
    missing values are not allowed in subscripted assignments of data frames
    --- failed re-building 'vignette_ecospat_package.Rmd'
    
    SUMMARY: processing the following file failed:
     'vignette_ecospat_package.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 3.1
Check: package dependencies
Result: NOTE
    Imports includes 21 non-default packages.
    Importing from so many packages makes the package vulnerable to any of
    them becoming unavailable. Move as many as possible to Suggests and
    use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 3.1
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘maps’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 3.1
Check: examples
Result: ERROR
    Running examples in ‘ecospat-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: ecospat.SESAM.prr
    > ### Title: SESAM Probability Ranking Rule
    > ### Aliases: ecospat.SESAM.prr
    >
    > ### ** Examples
    >
    > proba <- ecospat.testData[,73:92]
    > sr <- as.data.frame(rowSums(proba))
    > ppr<-ecospat.SESAM.prr(proba, sr)
    Error in `[<-.data.frame`(`*tmp*`, , pres, value = 1) :
     missing values are not allowed in subscripted assignments of data frames
    Calls: ecospat.SESAM.prr -> [<- -> [<-.data.frame
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 3.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘vignette_ecospat_package.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     The vignette engine knitr::rmarkdown is not available because the rmarkdown package is not available. Did you forget to add it to Suggests in DESCRIPTION? Please see https://github.com/yihui/knitr/issues/1864 for more information.
    Quitting from lines 463-465 (vignette_ecospat_package.Rmd)
    Error: processing vignette 'vignette_ecospat_package.Rmd' failed with diagnostics:
    missing values are not allowed in subscripted assignments of data frames
    --- failed re-building ‘vignette_ecospat_package.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘vignette_ecospat_package.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64

Version: 3.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘vignette_ecospat_package.Rmd’ using rmarkdown
    Quitting from lines 463-465 (vignette_ecospat_package.Rmd)
    Error: processing vignette 'vignette_ecospat_package.Rmd' failed with diagnostics:
    missing values are not allowed in subscripted assignments of data frames
    --- failed re-building ‘vignette_ecospat_package.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘vignette_ecospat_package.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc