rtables 0.3.5.9000

rtables 0.3.5

Documentation-text only changes to introduction vignette to pass CRAN’s URL checks. All package, example, test, and vignette code fully identical to that in tagged github release 0.3.4

rtables 0.3.4

Minor changes to the 0.3.3 version in order to submit rtables to CRAN.

rtables 0.3.3

This version completely refactors the rtables package. We do provide a backwards compatibility layer with the rtable, rcell, rrow, rheader, and rtabulate family of functions. However the table data structure and main tabulation framework have changed. We provide extensive documentation in the manuals help(package = "rtables") and vignettes vignette(package = "rtables") of the package.

The changes to rtables have been undertaken to better meet the requirements of creating and analyzing & reporting tables in the context of clinical trials.

rtables 0.3.2.17.9046

• make_afun now force()s all customization arguments immediately, which prevents problems when called within loop/lapply constructs.

rtables 0.3.2.17.9045

• Tabulation machinery no longer removes NAs mandatorily in some cases, including mutlivar column splits
• analyze_colvars’s inclNAs argument now respected.

rtables 0.3.2.17.9044

• Fix indent modifier propogation during tabulation
• Fix indent calculation in make_pagdf
• Add significant testing to ensure make_pagdf indent calculation remains correct

rtables 0.3.2.17.9043

• Rework how reference columns are handled so analyses which use .in_ref_col and .ref_group work correctly when custom splitting is used (including the provided combination-levels mechanism)

rtables 0.3.2.17.9042

• Fix naming/pathing for columns in multivar case (split itself now has default name “multivars”)
• Fix labelling bug when same variable appears multiple times in MultiVarSplit with different associated levels

rtables 0.3.2.17.9041

• Allow single variable to be used within split_cols_by_multivar
• Various removal of defunct

rtables 0.3.2.17.9040

• Fix regression caused by 0.3.2.17.9039 where column split values were displayed by name rather than label.

rtables 0.3.2.17.9039

• Fix bug in display of column information when column structure is not symetric, as with recursive cbinds.

rtables 0.3.2.17.9036

• Fixed bug in row subsetting when table has only content rows.
• Basic compare_rtables function now works as in previous versions, no awareness of row or column structure.

rtables 0.3.2.17.9036

• summarize_row_groups can now accept a list of functions for the cfun argument as analyze_colvars does.

rtables 0.3.2.17.9035

• Fix bug unearthed by change in 0.3.2.17.9034 where cell formats not retained during column subsetting

rtables 0.3.2.17.9034

• Fix internal value_formats accessor so it operates on CellValues rather than the raw contained values (thus always returning NULL)
• rrow constructor no longer interpretes cell formats a row format when they are the same across all cells. Fixes bug in “correct way” code discussed in #112

rtables 0.3.2.17.9033

• Interpret .formats in in_rows as cell formats rather than row formats.

rtables 0.3.2.17.9031

• cbind_rtables can now take more than 2 tables.

rtables 0.3.2.17.9029

• Fix issue underlying spurious length-missmatch warning in some cases when using analyze_colvars

rtables 0.3.2.17.9028

• analyze_colvars now takes and adheres to inclNAs argument

rtables 0.3.2.17.9027

• issues with no news:

rtables 0.1.7

• added format xx.xx (xx.xx - xx.xx) and x.xxxx | (<0.0001)

rtables 0.1.6

• Minor changes.

rtables 0.1.5

• Changed testing approach to fit internal pipelines.

rtables 0.1.4

• Replaced dots to underscore in class checking functions.

rtables 0.1.3

• col_by in rtabulate now accepts matrices:
  • col_by_to_matrix, col_by_to_factor, by_factor_to_matrix.
  • by_add_total, by_all, by_combine, by_quartile, by_compare_subset, by_hierarchical, by_drop_empty_cols.
• New utility functions to deal with variable labels:
  • label, var_labels<-, var_labels, var_labels_remove, var_relabel, with_label.
• Other new functions:
  • cbing_rtables.
  • empty_rtables, is_empty_rtable, is_non_empty_rtable, is_rtable.
  • header_indent, header_indent<-, header_row.names, header_row.names<-.
  • insert_rrow.

rtables 0.1.2

• rbind.rtable now supports binding rtables with rows, e.g. rbind(tbl1, rrow(), tbl2) or rbind(tbl1, rrow("row name"), tbl2).
• rbindl_rtables supports NULL objects in the list (except for the first element).
• Add indent function.
• header_add_N deals gracefully with NULL objects.

rtables 0.1.1

• rtablulate family of functions do not support the row_*_data_args arguments anymore. Instead, the col_wise_args argument is introduced.
• Functions order_rrows, sort_rrows, order_rtables, and sort_rtables are introduced.
• Prevent rtables from being unlisted with unlist.rtables.

rtables 0.1.0.6

• Viewer now also accepts objects of class shiny.tag (defined in package htmltools).
• as.html accepts class.table, class.tr, class.th, and class.td as an argument.

rtables 0.1.0.5

• Added sprintf_format for formatting rcells (thanks to Doug Kelkhoff for the suggestion).
• Added "(N=xx)" and ">999.9" format labels.
• rtabulate has now an argument col_N and the function col_N().

rtables 0.1.0

• Version 0.1.0 is a major re-design with lots of internal refactoring and the following API changes:
  • Redesign: rtable has now header argument instead of col.names. A header can be created with rheader and is a collection of rrows. If header is set to c("A", "B") then rtable will create the rheader with a single rrow and by setting row.name to NULL.
  • header and header<- function added.
  • Renamed get_rcell_formats to list_rcell_format_labels.
  • If rcell format is NULL then the cell content will be converted to a string with paste(as.character(x), collapse = ', ').
  • Accessor [i,] works now to subset a table.
  • rbind method for rtables.
  • row.names<-.rtable method.
  • rtabulate added for creating tables.
  • indented_row.names function added.

rtables 0.0.1

• Initial public release