Predicting the topology of membrane proteins is part of the field of computational biology. 'TMHMM' is a program to predict transmembrane helices in proteins. 'TMHMM' can be called from a website and/or locally using Bash. This package allows to install and call TMHMM from R and parse its results.
| Version: | 1.3 |
| Imports: | ggplot2, rappdirs, stringr, tibble |
| Suggests: | curl, testthat (≥ 2.1.0), knitr, rmarkdown |
| Published: | 2020-11-18 |
| Author: | Richel J.C. Bilderbeek |
| Maintainer: | Richel J.C. Bilderbeek <richel at richelbilderbeek.nl> |
| BugReports: | https://github.com/richelbilderbeek/tmhmm/issues |
| License: | GPL-3 |
| URL: | https://github.com/richelbilderbeek/tmhmm/ |
| NeedsCompilation: | no |
| SystemRequirements: | TMHMM (https://services.healthtech.dtu.dk/service.php?TMHMM-2.0) |
| CRAN checks: | tmhmm results |
| Reference manual: | tmhmm.pdf |
| Vignettes: |
Predict the Topology of a Membrane Protein |
| Package source: | tmhmm_1.3.tar.gz |
| Windows binaries: | r-devel: tmhmm_1.3.zip, r-release: tmhmm_1.3.zip, r-oldrel: tmhmm_1.3.zip |
| macOS binaries: | r-release: tmhmm_1.3.tgz, r-oldrel: tmhmm_1.3.tgz |
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