Last updated on 2021-03-04 00:48:02 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.3 | 15.96 | 157.81 | 173.77 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.1.3 | 14.13 | 113.29 | 127.42 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.1.3 | 213.65 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.3 | 203.00 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 2.1.3 | 32.00 | 197.00 | 229.00 | OK | |
| r-patched-linux-x86_64 | 2.1.3 | 11.50 | 146.04 | 157.54 | OK | |
| r-patched-solaris-x86 | 2.1.3 | 262.80 | NOTE | |||
| r-release-linux-x86_64 | 2.1.3 | 10.43 | 145.78 | 156.21 | OK | |
| r-release-macos-x86_64 | 2.1.3 | ERROR | ||||
| r-release-windows-ix86+x86_64 | 2.1.3 | 26.00 | 126.00 | 152.00 | WARN | |
| r-oldrel-macos-x86_64 | 2.1.3 | WARN | ||||
| r-oldrel-windows-ix86+x86_64 | 2.1.3 | 27.00 | 168.00 | 195.00 | WARN |
Version: 2.1.3
Check: package dependencies
Result: NOTE
Imports includes 35 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable. Move as many as possible to Suggests and
use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.1.3
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘BiocManager’ ‘DT’ ‘GEOmetadb’ ‘RMySQL’ ‘RSQLite’ ‘gplots’ ‘pheatmap’
‘readr’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-oldrel-macos-x86_64
Version: 2.1.3
Check: package dependencies
Result: ERROR
Package required but not available: ‘GEOmetadb’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-release-macos-x86_64
Version: 2.1.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building 'MetaIntegrator.Rmd' using rmarkdown
Quitting from lines 18-26 (MetaIntegrator.Rmd)
Error: processing vignette 'MetaIntegrator.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building 'MetaIntegrator.Rmd'
--- re-building 'MetaIntegratorRealExample.Rmd' using rmarkdown_notangle
--- finished re-building 'MetaIntegratorRealExample.Rmd'
SUMMARY: processing the following file failed:
'MetaIntegrator.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 2.1.3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘BiocStyle’
Flavor: r-oldrel-macos-x86_64
Version: 2.1.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘MetaIntegrator.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 29-30 (MetaIntegrator.Rmd)
Error: processing vignette 'MetaIntegrator.Rmd' failed with diagnostics:
there is no package called 'BiocStyle'
--- failed re-building ‘MetaIntegrator.Rmd’
--- re-building ‘MetaIntegratorRealExample.Rmd’ using rmarkdown_notangle
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘MetaIntegratorRealExample.Rmd’
SUMMARY: processing the following file failed:
‘MetaIntegrator.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-x86_64