tmod: Feature Set Enrichment Analysis for Metabolomics and Transcriptomics

Methods and feature set definitions for feature or gene set enrichment analysis in transcriptional and metabolic profiling data. Package includes tests for enrichment based on ranked lists of features, functions for visualisation and multivariate functional analysis.

Version: 0.46.2
Depends: R (≥ 2.10)
Imports: beeswarm, tagcloud, XML, methods, plotwidgets, RColorBrewer, gplots, colorDF
Suggests: testthat, knitr, rmarkdown, pca3d, R.rsp, dplyr
Published: 2020-10-02
Author: January Weiner
Maintainer: January Weiner <january.weiner at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)]
NeedsCompilation: no
Materials: README NEWS ChangeLog
CRAN checks: tmod results


Reference manual: tmod.pdf
Vignettes: The tmod Visualization Gallery
Package source: tmod_0.46.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release: tmod_0.46.2.tgz, r-oldrel: tmod_0.46.2.tgz
Old sources: tmod archive

Reverse dependencies:

Reverse imports: disco


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