Variations of Remove Unwanted Variation-III (RUV-III) known as RUV-III-C (RUV-III Complete). RUV-III performs normalisation using negative control variables and replication. RUV-III-C extends this method to cases where the data contains missing values, by applying RUV-III to complete subsets of the data. Originally designed for SWATH-MS proteomics datasets. Poulos et al. (2020) <doi:10.1038/s41467-020-17641-3>.
| Version: | 1.0.19 |
| Depends: | R (≥ 3.5), RSpectra, progress |
| LinkingTo: | Rcpp, RcppEigen, RSpectra, RcppProgress |
| Suggests: | ruv, testthat |
| Published: | 2021-04-23 |
| Author: | Rohan Shah [aut, cre], Sean Peters [ctb], Qing Zhong [ctb], Children's Medical Research Institute [cph] |
| Maintainer: | Rohan Shah <rshah at cmri.org.au> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | yes |
| SystemRequirements: | C++11 |
| CRAN checks: | RUVIIIC results |
| Reference manual: | RUVIIIC.pdf |
| Package source: | RUVIIIC_1.0.19.tar.gz |
| Windows binaries: | r-devel: RUVIIIC_1.0.19.zip, r-devel-UCRT: RUVIIIC_1.0.19.zip, r-release: RUVIIIC_1.0.19.zip, r-oldrel: RUVIIIC_1.0.19.zip |
| macOS binaries: | r-release (arm64): RUVIIIC_1.0.19.tgz, r-release (x86_64): RUVIIIC_1.0.19.tgz, r-oldrel: RUVIIIC_1.0.19.tgz |
| Old sources: | RUVIIIC archive |
Please use the canonical form https://CRAN.R-project.org/package=RUVIIIC to link to this page.