Visualisation tools for 'SMITIDstruct' package. Allow to visualize host timeline, transmission tree, index diversities and variant graph using 'HTMLwidgets'. It mainly using 'D3JS' javascript framework.
Version: | 0.0.9 |
Depends: | R (≥ 3.5.0), utils |
Imports: | Rcpp (≥ 0.11.0), htmlwidgets (≥ 0.3.2), yaml (≥ 2.1.16), jsonlite (≥ 1.5.0), magrittr |
LinkingTo: | Rcpp |
Suggests: | SMITIDstruct, knitr, shiny, testthat (≥ 3.0.0) |
Published: | 2021-02-08 |
Author: | Jean-Francois Rey [aut, cre], Julien Boge [ctb] |
Maintainer: | Jean-Francois Rey <jean-francois.rey at inrae.fr> |
License: | GPL (≥ 3) | file LICENSE |
URL: | https://informatique-mia.inrae.fr/biosp/anr-smitid-project/, https://gitlab.paca.inrae.fr/SMITID/visu/ |
NeedsCompilation: | yes |
SystemRequirements: | C++11 |
CRAN checks: | SMITIDvisu results |
Reference manual: | SMITIDvisu.pdf |
Package source: | SMITIDvisu_0.0.9.tar.gz |
Windows binaries: | r-devel: SMITIDvisu_0.0.9.zip, r-devel-UCRT: SMITIDvisu_0.0.9.zip, r-release: SMITIDvisu_0.0.9.zip, r-oldrel: SMITIDvisu_0.0.9.zip |
macOS binaries: | r-release (arm64): SMITIDvisu_0.0.9.tgz, r-release (x86_64): SMITIDvisu_0.0.9.tgz, r-oldrel: SMITIDvisu_0.0.9.tgz |
Old sources: | SMITIDvisu archive |
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