Tools for the statistical analysis of persistent homology and for density clustering. For that, this package provides an R interface for the efficient algorithms of the C++ libraries 'GUDHI' <http://gudhi.gforge.inria.fr/>, 'Dionysus' <https://www.mrzv.org/software/dionysus/>, and 'PHAT' <https://bitbucket.org/phat-code/phat/>. This package also implements the methods in Fasy et al. (2014) <doi:10.1214/14-AOS1252> and Chazal et al. (2014) <doi:10.1145/2582112.2582128> for analyzing the statistical significance of persistent homology features.
| Version: | 1.7.7 |
| Depends: | R (≥ 3.1.0) |
| Imports: | FNN, Rcpp (≥ 0.11.0), igraph, parallel, scales |
| LinkingTo: | BH (≥ 1.69.0-1), Rcpp, RcppEigen |
| Suggests: | testthat, lintr |
| Published: | 2021-03-30 |
| Author: | Brittany T. Fasy, Jisu Kim, Fabrizio Lecci, Clement Maria, David L. Millman, Vincent Rouvreau. |
| Maintainer: | Jisu Kim <jisu.kim at inria.fr> |
| License: | GPL-3 |
| Copyright: | See inst/COPYRIGHTS TDA copyright details |
| NeedsCompilation: | yes |
| SystemRequirements: | C++11, gmp |
| Materials: | README NEWS |
| CRAN checks: | TDA results |
| Reference manual: | TDA.pdf |
| Vignettes: |
Introduction to TDA |
| Package source: | TDA_1.7.7.tar.gz |
| Windows binaries: | r-devel: TDA_1.7.7.zip, r-devel-UCRT: TDA_1.7.7.zip, r-release: TDA_1.7.7.zip, r-oldrel: TDA_1.7.7.zip |
| macOS binaries: | r-release (arm64): TDA_1.7.7.tgz, r-release (x86_64): TDA_1.7.7.tgz, r-oldrel: TDA_1.7.7.tgz |
| Old sources: | TDA archive |
| Reverse suggests: | archiDART |
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