dynplot: Visualising Single-Cell Trajectories
Visualise a single-cell trajectory as a graph or dendrogram, as a dimensionality reduction or heatmap of the expression data, or a comparison between two trajectories as a pairwise scatterplot or dimensionality reduction projection. Saelens and Cannoodt et al. (2019) <doi:10.1038/s41587-019-0071-9>.
| Version: | 1.1.1 |
| Depends: | R (≥ 3.0.0) |
| Imports: | assertthat, dplyr, dynutils (≥ 1.0.2), dynfeature (≥ 1.0.0), dyndimred (≥ 1.0.0), dynwrap (≥ 1.0.0), GA, ggforce, ggplot2 (≥ 3.0), ggraph (≥ 2.0), ggrepel, igraph, MASS, methods, patchwork, purrr, reshape2, tibble, tidyr, tidygraph, vipor |
| Suggests: | covr, hexbin, knitr, RColorBrewer, rje, rmarkdown, testthat (≥ 3.0.0), uwot |
| Published: | 2021-06-28 |
| Author: | Robrecht Cannoodt 
[aut, cre, cph],
Wouter Saelens
[aut] |
| Maintainer: | Robrecht Cannoodt <rcannood at gmail.com> |
| BugReports: | https://github.com/dynverse/dynplot/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/dynverse/dynplot |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | dynplot results |
Downloads:
| Reference manual: | dynplot.pdf |
| Vignettes: |
generate_file_from_container(x) |
| Package source: | dynplot_1.1.1.tar.gz |
| Windows binaries: | r-devel: dynplot_1.1.1.zip, r-release: dynplot_1.1.0.zip, r-oldrel: dynplot_1.1.1.zip |
| macOS binaries: | r-release (arm64): dynplot_1.1.0.tgz, r-release (x86_64): dynplot_1.1.1.tgz, r-oldrel: dynplot_1.1.1.tgz |
| Old sources: | dynplot archive |
Linking:
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