pedprobr: Probability Computations on Pedigrees
An implementation of the Elston-Stewart algorithm for calculating pedigree likelihoods given genetic marker data (Elston and Stewart (1971) <doi:10.1159/000152448>). The standard algorithm is extended to allow inbred founders. 'pedprobr' is part of the ped suite, a collection of packages for pedigree analysis in R, based on 'pedtools' for handling pedigrees and markers. Mutation modelling is supported by the 'pedmut' package.
| Version: | 0.5.0 |
| Depends: | R (≥ 3.1.0), pedtools |
| Imports: | pedmut |
| Suggests: | testthat |
| Published: | 2021-03-27 |
| Author: | Magnus Dehli Vigeland
 [aut, cre] |
| Maintainer: | Magnus Dehli Vigeland <m.d.vigeland at medisin.uio.no> |
| BugReports: | https://github.com/magnusdv/pedprobr/issues |
| License: | GPL-3 |
| URL: | https://github.com/magnusdv/pedprobr |
| NeedsCompilation: | no |
| Language: | en-GB |
| Materials: | README NEWS |
| CRAN checks: | pedprobr results |
Downloads:
| Reference manual: | pedprobr.pdf |
| Package source: | pedprobr_0.5.0.tar.gz |
| Windows binaries: | r-devel: pedprobr_0.5.0.zip, r-release: pedprobr_0.5.0.zip, r-oldrel: pedprobr_0.5.0.zip |
| macOS binaries: | r-release (arm64): pedprobr_0.5.0.tgz, r-release (x86_64): pedprobr_0.5.0.tgz, r-oldrel: pedprobr_0.5.0.tgz |
| Old sources: | pedprobr archive |
Reverse dependencies:
| Reverse depends: | pedsuite |
| Reverse imports: | dvir, forrel, paramlink2, pedbuildr, segregatr |
Linking:
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